Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.28■□□□□ 0.84
ABCD3P28288 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.28■□□□□ 0.84
ABCD3P28288 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCD3P28288 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.28■□□□□ 0.84
ABCD3P28288 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCD3P28288 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCD3P28288 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCD3P28288 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCD3P28288 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ABCD3P28288 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ABCD3P28288 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ABCD3P28288 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ABCD3P28288 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
ABCD3P28288 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ABCD3P28288 AC099791.1-201ENST00000416440 715 ntBASIC20.27■□□□□ 0.84
ABCD3P28288 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.27■□□□□ 0.84
ABCD3P28288 AC091305.1-201ENST00000479476 895 ntBASIC20.27■□□□□ 0.84
ABCD3P28288 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.27■□□□□ 0.84
ABCD3P28288 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ABCD3P28288 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.27■□□□□ 0.84
ABCD3P28288 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.27■□□□□ 0.83
ABCD3P28288 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.26■□□□□ 0.83
ABCD3P28288 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCD3P28288 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCD3P28288 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
ABCD3P28288 RASA4CP-201ENST00000424092 1398 ntBASIC20.26■□□□□ 0.83
ABCD3P28288 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.26■□□□□ 0.83
ABCD3P28288 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.26■□□□□ 0.83
ABCD3P28288 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.26■□□□□ 0.83
ABCD3P28288 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCD3P28288 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.26■□□□□ 0.83
ABCD3P28288 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ABCD3P28288 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCD3P28288 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCD3P28288 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCD3P28288 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ABCD3P28288 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCD3P28288 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.25■□□□□ 0.83
ABCD3P28288 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ABCD3P28288 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCD3P28288 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCD3P28288 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCD3P28288 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ABCD3P28288 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCD3P28288 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCD3P28288 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.24■□□□□ 0.83
ABCD3P28288 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.24■□□□□ 0.83
ABCD3P28288 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCD3P28288 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ABCD3P28288 LINC01960-201ENST00000563759 1884 ntBASIC20.24■□□□□ 0.83
ABCD3P28288 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCD3P28288 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCD3P28288 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.24■□□□□ 0.83
ABCD3P28288 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ABCD3P28288 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD3P28288 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD3P28288 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD3P28288 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
ABCD3P28288 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD3P28288 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD3P28288 AC126544.1-201ENST00000580842 1059 ntBASIC20.23■□□□□ 0.83
ABCD3P28288 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.23■□□□□ 0.83
ABCD3P28288 AL031602.1-201ENST00000633169 911 ntBASIC20.23■□□□□ 0.83
ABCD3P28288 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCD3P28288 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCD3P28288 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
ABCD3P28288 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD3P28288 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ABCD3P28288 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCD3P28288 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD3P28288 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ABCD3P28288 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCD3P28288 CA15P2-201ENST00000611168 834 ntBASIC20.22■□□□□ 0.83
ABCD3P28288 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD3P28288 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD3P28288 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ABCD3P28288 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ABCD3P28288 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCD3P28288 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCD3P28288 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ABCD3P28288 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCD3P28288 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD3P28288 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD3P28288 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD3P28288 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ABCD3P28288 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD3P28288 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCD3P28288 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.21■□□□□ 0.83
ABCD3P28288 AP005435.1-201ENST00000529293 1178 ntBASIC20.21■□□□□ 0.83
ABCD3P28288 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.21■□□□□ 0.83
ABCD3P28288 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms