Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
PRKCAP17252 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRKCAP17252 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.24■□□□□ 0.83
PRKCAP17252 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRKCAP17252 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.23■□□□□ 0.83
PRKCAP17252 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRKCAP17252 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.23■□□□□ 0.83
PRKCAP17252 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PRKCAP17252 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRKCAP17252 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.23■□□□□ 0.83
PRKCAP17252 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRKCAP17252 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRKCAP17252 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.23■□□□□ 0.83
PRKCAP17252 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.23■□□□□ 0.83
PRKCAP17252 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRKCAP17252 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PRKCAP17252 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.23■□□□□ 0.83
PRKCAP17252 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRKCAP17252 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRKCAP17252 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PRKCAP17252 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PRKCAP17252 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRKCAP17252 AC099791.2-201ENST00000605725 427 ntBASIC20.22■□□□□ 0.83
PRKCAP17252 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRKCAP17252 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
PRKCAP17252 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRKCAP17252 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRKCAP17252 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.21■□□□□ 0.83
PRKCAP17252 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.21■□□□□ 0.83
PRKCAP17252 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PRKCAP17252 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.21■□□□□ 0.83
PRKCAP17252 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRKCAP17252 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
PRKCAP17252 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.21■□□□□ 0.83
PRKCAP17252 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 AC009086.3-201ENST00000623486 1008 ntBASIC20.21■□□□□ 0.83
PRKCAP17252 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PRKCAP17252 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
PRKCAP17252 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
PRKCAP17252 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.21■□□□□ 0.83
PRKCAP17252 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRKCAP17252 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PRKCAP17252 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRKCAP17252 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRKCAP17252 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.2■□□□□ 0.82
PRKCAP17252 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PRKCAP17252 AL136116.3-201ENST00000402907 1138 ntBASIC20.2■□□□□ 0.82
PRKCAP17252 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.2■□□□□ 0.82
PRKCAP17252 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.2■□□□□ 0.82
PRKCAP17252 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRKCAP17252 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRKCAP17252 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRKCAP17252 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.2■□□□□ 0.82
PRKCAP17252 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRKCAP17252 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.19■□□□□ 0.82
PRKCAP17252 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PRKCAP17252 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PRKCAP17252 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRKCAP17252 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.19■□□□□ 0.82
PRKCAP17252 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRKCAP17252 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRKCAP17252 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.19■□□□□ 0.82
PRKCAP17252 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.19■□□□□ 0.82
PRKCAP17252 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.19■□□□□ 0.82
PRKCAP17252 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRKCAP17252 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRKCAP17252 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
PRKCAP17252 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRKCAP17252 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 AC006455.2-201ENST00000429931 906 ntBASIC20.18■□□□□ 0.82
PRKCAP17252 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.18■□□□□ 0.82
PRKCAP17252 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.18■□□□□ 0.82
PRKCAP17252 AC008406.3-201ENST00000620001 1374 ntBASIC20.18■□□□□ 0.82
PRKCAP17252 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRKCAP17252 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRKCAP17252 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PRKCAP17252 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.17■□□□□ 0.82
PRKCAP17252 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRKCAP17252 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRKCAP17252 AC092171.4-201ENST00000609130 632 ntBASIC20.17■□□□□ 0.82
PRKCAP17252 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRKCAP17252 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.17■□□□□ 0.82
PRKCAP17252 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRKCAP17252 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PRKCAP17252 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRKCAP17252 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRKCAP17252 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PRKCAP17252 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms