Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 AC137630.3-201ENST00000607245 391 ntBASIC18.79■□□□□ 0.6
VSIG8P0DPA2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSIG8P0DPA2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 AC005703.6-201ENST00000623265 1329 ntBASIC18.78■□□□□ 0.6
VSIG8P0DPA2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 AC103724.3-201ENST00000564481 992 ntBASIC18.78■□□□□ 0.6
VSIG8P0DPA2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSIG8P0DPA2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 AC010542.4-201ENST00000563151 1910 ntBASIC18.77■□□□□ 0.6
VSIG8P0DPA2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 AC026310.3-201ENST00000625186 2373 ntBASIC18.77■□□□□ 0.6
VSIG8P0DPA2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VSIG8P0DPA2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VSIG8P0DPA2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
VSIG8P0DPA2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VSIG8P0DPA2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.77■□□□□ 0.59
VSIG8P0DPA2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VSIG8P0DPA2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 FAM99A-202ENST00000538190 1989 ntBASIC18.76■□□□□ 0.59
VSIG8P0DPA2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 MIR6722-201ENST00000617286 78 ntBASIC18.76■□□□□ 0.59
VSIG8P0DPA2 AC009086.3-201ENST00000623486 1008 ntBASIC18.76■□□□□ 0.59
VSIG8P0DPA2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VSIG8P0DPA2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 DUX4L4-201ENST00000566884 1269 ntBASIC18.75■□□□□ 0.59
VSIG8P0DPA2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VSIG8P0DPA2 KRT8P33-201ENST00000508125 1423 ntBASIC18.74■□□□□ 0.59
VSIG8P0DPA2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 AL024507.2-201ENST00000606070 2574 ntBASIC18.74■□□□□ 0.59
VSIG8P0DPA2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 YBX1P4-201ENST00000392794 808 ntBASIC18.74■□□□□ 0.59
VSIG8P0DPA2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG8P0DPA2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms