Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 AL356441.2-201ENST00000443009 864 ntBASIC18.65■□□□□ 0.58
ZNF728P0DKX0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF728P0DKX0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF728P0DKX0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF728P0DKX0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF728P0DKX0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF728P0DKX0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 AC079630.1-202ENST00000618127 1840 ntBASIC18.62■□□□□ 0.57
ZNF728P0DKX0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF728P0DKX0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 AC007375.3-201ENST00000600936 2314 ntBASIC18.61■□□□□ 0.57
ZNF728P0DKX0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF728P0DKX0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 AL356740.2-201ENST00000601559 647 ntBASIC18.6■□□□□ 0.57
ZNF728P0DKX0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF728P0DKX0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms