Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 SYT6-210ENST00000641643 1587 ntBASIC23.9■■□□□ 1.42
TRIM49CP0CI26 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49CP0CI26 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM49CP0CI26 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM49CP0CI26 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM49CP0CI26 AL117328.2-201ENST00000624617 1940 ntBASIC23.89■■□□□ 1.42
TRIM49CP0CI26 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM49CP0CI26 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM49CP0CI26 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM49CP0CI26 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
TRIM49CP0CI26 AC008406.3-201ENST00000620001 1374 ntBASIC23.89■■□□□ 1.41
TRIM49CP0CI26 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.41
TRIM49CP0CI26 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIM49CP0CI26 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49CP0CI26 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 ESRRAP2-201ENST00000418437 1549 ntBASIC23.87■■□□□ 1.41
TRIM49CP0CI26 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49CP0CI26 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 EP400NL-214ENST00000641289 2402 ntBASIC23.86■■□□□ 1.41
TRIM49CP0CI26 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM49CP0CI26 AC080038.3-201ENST00000623346 1952 ntBASIC23.85■■□□□ 1.41
TRIM49CP0CI26 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 AC127496.7-201ENST00000625110 1798 ntBASIC23.85■■□□□ 1.41
TRIM49CP0CI26 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49CP0CI26 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49CP0CI26 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 DUX4L19-201ENST00000557448 1267 ntBASIC23.83■■□□□ 1.41
TRIM49CP0CI26 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 AC010525.1-201ENST00000585559 441 ntBASIC23.83■■□□□ 1.41
TRIM49CP0CI26 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM49CP0CI26 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms