Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22■■□□□ 1.11
SNRPAP09012 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 AC103724.3-201ENST00000564481 992 ntBASIC22■■□□□ 1.11
SNRPAP09012 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22■■□□□ 1.11
SNRPAP09012 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SNRPAP09012 MIR6722-201ENST00000617286 78 ntBASIC22■■□□□ 1.11
SNRPAP09012 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SNRPAP09012 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22■■□□□ 1.11
SNRPAP09012 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SNRPAP09012 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SNRPAP09012 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNRPAP09012 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.99■■□□□ 1.11
SNRPAP09012 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.99■■□□□ 1.11
SNRPAP09012 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.99■■□□□ 1.11
SNRPAP09012 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.99■■□□□ 1.11
SNRPAP09012 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.99■■□□□ 1.11
SNRPAP09012 AC009086.3-201ENST00000623486 1008 ntBASIC21.99■■□□□ 1.11
SNRPAP09012 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.99■■□□□ 1.11
SNRPAP09012 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNRPAP09012 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.99■■□□□ 1.11
SNRPAP09012 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.99■■□□□ 1.11
SNRPAP09012 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.99■■□□□ 1.11
SNRPAP09012 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.98■■□□□ 1.11
SNRPAP09012 DUX4L4-201ENST00000566884 1269 ntBASIC21.98■■□□□ 1.11
SNRPAP09012 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.98■■□□□ 1.11
SNRPAP09012 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SNRPAP09012 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.98■■□□□ 1.11
SNRPAP09012 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNRPAP09012 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.97■■□□□ 1.11
SNRPAP09012 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.97■■□□□ 1.11
SNRPAP09012 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SNRPAP09012 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNRPAP09012 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.97■■□□□ 1.11
SNRPAP09012 YBX1P4-201ENST00000392794 808 ntBASIC21.97■■□□□ 1.11
SNRPAP09012 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.97■■□□□ 1.11
SNRPAP09012 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.97■■□□□ 1.11
SNRPAP09012 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNRPAP09012 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNRPAP09012 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNRPAP09012 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.96■■□□□ 1.11
SNRPAP09012 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.96■■□□□ 1.11
SNRPAP09012 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SNRPAP09012 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNRPAP09012 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.95■■□□□ 1.11
SNRPAP09012 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.95■■□□□ 1.1
SNRPAP09012 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SNRPAP09012 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.95■■□□□ 1.1
SNRPAP09012 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.95■■□□□ 1.1
SNRPAP09012 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.95■■□□□ 1.1
SNRPAP09012 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SNRPAP09012 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.95■■□□□ 1.1
SNRPAP09012 AC010542.4-201ENST00000563151 1910 ntBASIC21.95■■□□□ 1.1
SNRPAP09012 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SNRPAP09012 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 KRT8P33-201ENST00000508125 1423 ntBASIC21.95■■□□□ 1.1
SNRPAP09012 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNRPAP09012 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
SNRPAP09012 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.94■■□□□ 1.1
SNRPAP09012 AC012354.3-201ENST00000623734 483 ntBASIC21.94■■□□□ 1.1
SNRPAP09012 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRPAP09012 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SNRPAP09012 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SNRPAP09012 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.94■■□□□ 1.1
SNRPAP09012 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms