Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.25■□□□□ 0.83
THBS1P07996 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 AL356740.2-201ENST00000601559 647 ntBASIC20.25■□□□□ 0.83
THBS1P07996 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.25■□□□□ 0.83
THBS1P07996 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
THBS1P07996 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.25■□□□□ 0.83
THBS1P07996 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.25■□□□□ 0.83
THBS1P07996 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.25■□□□□ 0.83
THBS1P07996 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS1P07996 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
THBS1P07996 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
THBS1P07996 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
THBS1P07996 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
THBS1P07996 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
THBS1P07996 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.24■□□□□ 0.83
THBS1P07996 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.24■□□□□ 0.83
THBS1P07996 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS1P07996 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.23■□□□□ 0.83
THBS1P07996 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THBS1P07996 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THBS1P07996 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.23■□□□□ 0.83
THBS1P07996 MIR3621-201ENST00000580529 85 ntBASIC20.23■□□□□ 0.83
THBS1P07996 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.23■□□□□ 0.83
THBS1P07996 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THBS1P07996 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.23■□□□□ 0.83
THBS1P07996 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
THBS1P07996 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
THBS1P07996 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.22■□□□□ 0.83
THBS1P07996 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
THBS1P07996 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THBS1P07996 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
THBS1P07996 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
THBS1P07996 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
THBS1P07996 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THBS1P07996 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.22■□□□□ 0.83
THBS1P07996 CA15P2-201ENST00000611168 834 ntBASIC20.22■□□□□ 0.83
THBS1P07996 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
THBS1P07996 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THBS1P07996 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
THBS1P07996 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
THBS1P07996 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.22■□□□□ 0.83
THBS1P07996 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THBS1P07996 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 LINC00565-201ENST00000562710 2331 ntBASIC20.21■□□□□ 0.83
THBS1P07996 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.21■□□□□ 0.83
THBS1P07996 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.21■□□□□ 0.83
THBS1P07996 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
THBS1P07996 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
THBS1P07996 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
THBS1P07996 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
THBS1P07996 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.21■□□□□ 0.83
THBS1P07996 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
THBS1P07996 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS1P07996 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
THBS1P07996 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
THBS1P07996 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.2■□□□□ 0.82
THBS1P07996 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.2■□□□□ 0.82
THBS1P07996 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
THBS1P07996 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.2■□□□□ 0.82
THBS1P07996 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THBS1P07996 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
THBS1P07996 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.19■□□□□ 0.82
THBS1P07996 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.19■□□□□ 0.82
THBS1P07996 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.19■□□□□ 0.82
THBS1P07996 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
THBS1P07996 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS1P07996 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms