Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDGFAP04085 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.5■□□□□ 0.87
PDGFAP04085 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDGFAP04085 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.5■□□□□ 0.87
PDGFAP04085 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDGFAP04085 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.49■□□□□ 0.87
PDGFAP04085 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.49■□□□□ 0.87
PDGFAP04085 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.49■□□□□ 0.87
PDGFAP04085 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDGFAP04085 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.49■□□□□ 0.87
PDGFAP04085 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
PDGFAP04085 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.49■□□□□ 0.87
PDGFAP04085 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDGFAP04085 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDGFAP04085 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PDGFAP04085 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFAP04085 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDGFAP04085 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.48■□□□□ 0.87
PDGFAP04085 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.48■□□□□ 0.87
PDGFAP04085 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDGFAP04085 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.48■□□□□ 0.87
PDGFAP04085 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.48■□□□□ 0.87
PDGFAP04085 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFAP04085 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDGFAP04085 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFAP04085 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
PDGFAP04085 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.47■□□□□ 0.87
PDGFAP04085 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.47■□□□□ 0.87
PDGFAP04085 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.47■□□□□ 0.87
PDGFAP04085 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.47■□□□□ 0.87
PDGFAP04085 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.47■□□□□ 0.87
PDGFAP04085 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDGFAP04085 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFAP04085 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PDGFAP04085 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDGFAP04085 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.46■□□□□ 0.87
PDGFAP04085 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.46■□□□□ 0.87
PDGFAP04085 AL024507.2-201ENST00000606070 2574 ntBASIC20.46■□□□□ 0.87
PDGFAP04085 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFAP04085 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.46■□□□□ 0.87
PDGFAP04085 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFAP04085 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.46■□□□□ 0.87
PDGFAP04085 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
PDGFAP04085 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFAP04085 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFAP04085 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFAP04085 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.45■□□□□ 0.87
PDGFAP04085 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PDGFAP04085 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.45■□□□□ 0.86
PDGFAP04085 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.45■□□□□ 0.86
PDGFAP04085 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.45■□□□□ 0.86
PDGFAP04085 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.45■□□□□ 0.86
PDGFAP04085 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFAP04085 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFAP04085 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDGFAP04085 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.44■□□□□ 0.86
PDGFAP04085 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFAP04085 AC105233.4-201ENST00000642045 216 ntBASIC20.44■□□□□ 0.86
PDGFAP04085 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFAP04085 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFAP04085 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFAP04085 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.44■□□□□ 0.86
PDGFAP04085 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.43■□□□□ 0.86
PDGFAP04085 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFAP04085 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDGFAP04085 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.43■□□□□ 0.86
PDGFAP04085 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms