Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LINC01960-201ENST00000563759 1884 ntBASIC23.7■■□□□ 1.38
HLA-DRAP01903 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HLA-DRAP01903 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HLA-DRAP01903 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 AC087742.1-201ENST00000575880 1738 ntBASIC23.69■■□□□ 1.38
HLA-DRAP01903 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HLA-DRAP01903 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HLA-DRAP01903 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DRAP01903 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
HLA-DRAP01903 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.68■■□□□ 1.38
HLA-DRAP01903 AC106739.1-201ENST00000617035 715 ntBASIC23.68■■□□□ 1.38
HLA-DRAP01903 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DRAP01903 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.68■■□□□ 1.38
HLA-DRAP01903 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DRAP01903 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DRAP01903 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DRAP01903 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DRAP01903 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DRAP01903 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
HLA-DRAP01903 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.67■■□□□ 1.38
HLA-DRAP01903 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
HLA-DRAP01903 SLC47A1P1-202ENST00000449666 945 ntBASIC23.67■■□□□ 1.38
HLA-DRAP01903 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
HLA-DRAP01903 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DRAP01903 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.67■■□□□ 1.38
HLA-DRAP01903 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DRAP01903 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.66■■□□□ 1.38
HLA-DRAP01903 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DRAP01903 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
HLA-DRAP01903 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 ESRRAP2-201ENST00000418437 1549 ntBASIC23.65■■□□□ 1.38
HLA-DRAP01903 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 AL139246.5-201ENST00000606645 996 ntBASIC23.65■■□□□ 1.38
HLA-DRAP01903 AL031602.1-201ENST00000633169 911 ntBASIC23.65■■□□□ 1.38
HLA-DRAP01903 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HLA-DRAP01903 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.65■■□□□ 1.38
HLA-DRAP01903 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
HLA-DRAP01903 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HLA-DRAP01903 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
HLA-DRAP01903 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HLA-DRAP01903 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HLA-DRAP01903 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HLA-DRAP01903 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
HLA-DRAP01903 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.64■■□□□ 1.37
HLA-DRAP01903 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.64■■□□□ 1.37
HLA-DRAP01903 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HLA-DRAP01903 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HLA-DRAP01903 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
HLA-DRAP01903 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HLA-DRAP01903 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.63■■□□□ 1.37
HLA-DRAP01903 AC233723.2-201ENST00000623798 2106 ntBASIC23.63■■□□□ 1.37
HLA-DRAP01903 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HLA-DRAP01903 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.63■■□□□ 1.37
HLA-DRAP01903 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HLA-DRAP01903 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HLA-DRAP01903 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
HLA-DRAP01903 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
HLA-DRAP01903 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.62■■□□□ 1.37
HLA-DRAP01903 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.62■■□□□ 1.37
HLA-DRAP01903 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
HLA-DRAP01903 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.62■■□□□ 1.37
HLA-DRAP01903 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HLA-DRAP01903 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
HLA-DRAP01903 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
HLA-DRAP01903 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms