Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.78■■□□□ 1.08
SOD1P00441 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.78■■□□□ 1.08
SOD1P00441 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOD1P00441 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOD1P00441 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.78■■□□□ 1.08
SOD1P00441 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.78■■□□□ 1.08
SOD1P00441 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.78■■□□□ 1.08
SOD1P00441 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOD1P00441 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SOD1P00441 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOD1P00441 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOD1P00441 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOD1P00441 IRS3P-201ENST00000223076 1006 ntBASIC21.77■■□□□ 1.08
SOD1P00441 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
SOD1P00441 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.77■■□□□ 1.08
SOD1P00441 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
SOD1P00441 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOD1P00441 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOD1P00441 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.77■■□□□ 1.07
SOD1P00441 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SOD1P00441 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.76■■□□□ 1.07
SOD1P00441 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.76■■□□□ 1.07
SOD1P00441 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SOD1P00441 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOD1P00441 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SOD1P00441 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOD1P00441 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOD1P00441 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOD1P00441 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOD1P00441 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOD1P00441 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.74■■□□□ 1.07
SOD1P00441 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOD1P00441 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.74■■□□□ 1.07
SOD1P00441 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SOD1P00441 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.74■■□□□ 1.07
SOD1P00441 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SOD1P00441 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOD1P00441 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOD1P00441 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.74■■□□□ 1.07
SOD1P00441 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOD1P00441 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.74■■□□□ 1.07
SOD1P00441 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
SOD1P00441 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOD1P00441 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SOD1P00441 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.74■■□□□ 1.07
SOD1P00441 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.73■■□□□ 1.07
SOD1P00441 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOD1P00441 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SOD1P00441 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOD1P00441 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.73■■□□□ 1.07
SOD1P00441 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOD1P00441 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.73■■□□□ 1.07
SOD1P00441 MIR572-201ENST00000384983 95 ntBASIC21.73■■□□□ 1.07
SOD1P00441 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOD1P00441 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOD1P00441 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOD1P00441 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SOD1P00441 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOD1P00441 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOD1P00441 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.72■■□□□ 1.07
SOD1P00441 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOD1P00441 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.72■■□□□ 1.07
SOD1P00441 AC068587.7-201ENST00000641602 218 ntBASIC21.72■■□□□ 1.07
SOD1P00441 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOD1P00441 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.71■■□□□ 1.07
SOD1P00441 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 AC026271.2-201ENST00000428091 497 ntBASIC21.71■■□□□ 1.07
SOD1P00441 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.71■■□□□ 1.07
SOD1P00441 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
SOD1P00441 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.71■■□□□ 1.07
SOD1P00441 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.71■■□□□ 1.07
SOD1P00441 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOD1P00441 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
SOD1P00441 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
SOD1P00441 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.7■■□□□ 1.06
SOD1P00441 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOD1P00441 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOD1P00441 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.7■■□□□ 1.06
SOD1P00441 RARRES2P6-201ENST00000567333 442 ntBASIC21.7■■□□□ 1.06
SOD1P00441 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.7■■□□□ 1.06
SOD1P00441 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SOD1P00441 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms