Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ALDH1A1P00352 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ALDH1A1P00352 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.5■■□□□ 1.67
ALDH1A1P00352 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.5■■□□□ 1.67
ALDH1A1P00352 AC008687.6-201ENST00000596318 630 ntBASIC25.5■■□□□ 1.67
ALDH1A1P00352 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.5■■□□□ 1.67
ALDH1A1P00352 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ALDH1A1P00352 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ALDH1A1P00352 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
ALDH1A1P00352 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
ALDH1A1P00352 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ALDH1A1P00352 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.48■■□□□ 1.67
ALDH1A1P00352 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ALDH1A1P00352 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.48■■□□□ 1.67
ALDH1A1P00352 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ALDH1A1P00352 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ALDH1A1P00352 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.48■■□□□ 1.67
ALDH1A1P00352 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ALDH1A1P00352 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ALDH1A1P00352 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.47■■□□□ 1.67
ALDH1A1P00352 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ALDH1A1P00352 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ALDH1A1P00352 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ALDH1A1P00352 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ALDH1A1P00352 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ALDH1A1P00352 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.46■■□□□ 1.67
ALDH1A1P00352 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.46■■□□□ 1.67
ALDH1A1P00352 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.45■■□□□ 1.67
ALDH1A1P00352 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ALDH1A1P00352 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
ALDH1A1P00352 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ALDH1A1P00352 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ALDH1A1P00352 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.45■■□□□ 1.66
ALDH1A1P00352 POU5F1P3-201ENST00000428824 1078 ntBASIC25.45■■□□□ 1.66
ALDH1A1P00352 AC010141.3-201ENST00000456659 717 ntBASIC25.45■■□□□ 1.66
ALDH1A1P00352 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
ALDH1A1P00352 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.45■■□□□ 1.66
ALDH1A1P00352 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.45■■□□□ 1.66
ALDH1A1P00352 ITM2C-210ENST00000620962 501 ntBASIC25.45■■□□□ 1.66
ALDH1A1P00352 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.45■■□□□ 1.66
ALDH1A1P00352 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ALDH1A1P00352 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ALDH1A1P00352 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ALDH1A1P00352 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.44■■□□□ 1.66
ALDH1A1P00352 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ALDH1A1P00352 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
ALDH1A1P00352 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.44■■□□□ 1.66
ALDH1A1P00352 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ALDH1A1P00352 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ALDH1A1P00352 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.44■■□□□ 1.66
ALDH1A1P00352 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
ALDH1A1P00352 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ALDH1A1P00352 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ALDH1A1P00352 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ALDH1A1P00352 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.43■■□□□ 1.66
ALDH1A1P00352 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.43■■□□□ 1.66
ALDH1A1P00352 AF201337.1-201ENST00000520239 748 ntBASIC25.43■■□□□ 1.66
ALDH1A1P00352 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
ALDH1A1P00352 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.43■■□□□ 1.66
ALDH1A1P00352 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ALDH1A1P00352 DUSP8P4-201ENST00000399538 1761 ntBASIC25.43■■□□□ 1.66
ALDH1A1P00352 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
ALDH1A1P00352 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.42■■□□□ 1.66
ALDH1A1P00352 KRT18P29-201ENST00000397031 1267 ntBASIC25.42■■□□□ 1.66
ALDH1A1P00352 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.42■■□□□ 1.66
ALDH1A1P00352 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.42■■□□□ 1.66
ALDH1A1P00352 AC104187.1-201ENST00000607510 612 ntBASIC25.42■■□□□ 1.66
ALDH1A1P00352 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
ALDH1A1P00352 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ALDH1A1P00352 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ALDH1A1P00352 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ALDH1A1P00352 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
ALDH1A1P00352 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ALDH1A1P00352 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.41■■□□□ 1.66
ALDH1A1P00352 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ALDH1A1P00352 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
ALDH1A1P00352 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.41■■□□□ 1.66
ALDH1A1P00352 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
ALDH1A1P00352 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
ALDH1A1P00352 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.41■■□□□ 1.66
ALDH1A1P00352 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ALDH1A1P00352 KRT87P-202ENST00000534226 1464 ntBASIC25.4■■□□□ 1.66
ALDH1A1P00352 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ALDH1A1P00352 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ALDH1A1P00352 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ALDH1A1P00352 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC25.4■■□□□ 1.66
ALDH1A1P00352 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ALDH1A1P00352 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms