Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TOMM40O96008 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 PKD1P6-201ENST00000343738 4769 ntBASIC17.15■□□□□ 0.34
TOMM40O96008 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TOMM40O96008 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TOMM40O96008 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.15■□□□□ 0.34
TOMM40O96008 Z92544.1-202ENST00000571933 1220 ntBASIC17.15■□□□□ 0.34
TOMM40O96008 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOMM40O96008 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.15■□□□□ 0.34
TOMM40O96008 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.14■□□□□ 0.33
TOMM40O96008 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TOMM40O96008 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.14■□□□□ 0.33
TOMM40O96008 MTDHP2-201ENST00000601468 714 ntBASIC17.14■□□□□ 0.33
TOMM40O96008 AC009086.3-201ENST00000623486 1008 ntBASIC17.14■□□□□ 0.33
TOMM40O96008 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TOMM40O96008 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOMM40O96008 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.13■□□□□ 0.33
TOMM40O96008 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.13■□□□□ 0.33
TOMM40O96008 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.13■□□□□ 0.33
TOMM40O96008 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOMM40O96008 DUX4L4-201ENST00000566884 1269 ntBASIC17.13■□□□□ 0.33
TOMM40O96008 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.13■□□□□ 0.33
TOMM40O96008 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TOMM40O96008 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.12■□□□□ 0.33
TOMM40O96008 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TOMM40O96008 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TOMM40O96008 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
TOMM40O96008 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 AC087742.1-201ENST00000575880 1738 ntBASIC17.12■□□□□ 0.33
TOMM40O96008 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TOMM40O96008 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOMM40O96008 AC092053.2-201ENST00000640557 1818 ntBASIC17.12■□□□□ 0.33
TOMM40O96008 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TOMM40O96008 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.11■□□□□ 0.33
TOMM40O96008 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TOMM40O96008 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 AC139530.1-201ENST00000575312 1977 ntBASIC17.11■□□□□ 0.33
TOMM40O96008 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TOMM40O96008 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOMM40O96008 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TOMM40O96008 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TOMM40O96008 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TOMM40O96008 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TOMM40O96008 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.1■□□□□ 0.33
TOMM40O96008 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOMM40O96008 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.09■□□□□ 0.33
TOMM40O96008 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.09■□□□□ 0.33
TOMM40O96008 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.09■□□□□ 0.33
TOMM40O96008 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TOMM40O96008 MIR4787-201ENST00000607364 84 ntBASIC17.09■□□□□ 0.33
TOMM40O96008 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms