Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
S1PR4O95977 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
S1PR4O95977 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
S1PR4O95977 AC139530.1-201ENST00000575312 1977 ntBASIC21.87■■□□□ 1.09
S1PR4O95977 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
S1PR4O95977 AC131281.2-201ENST00000520478 145 ntBASIC21.87■■□□□ 1.09
S1PR4O95977 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.87■■□□□ 1.09
S1PR4O95977 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.87■■□□□ 1.09
S1PR4O95977 AC099791.2-201ENST00000605725 427 ntBASIC21.87■■□□□ 1.09
S1PR4O95977 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
S1PR4O95977 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
S1PR4O95977 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
S1PR4O95977 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
S1PR4O95977 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
S1PR4O95977 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
S1PR4O95977 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
S1PR4O95977 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
S1PR4O95977 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
S1PR4O95977 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.86■■□□□ 1.09
S1PR4O95977 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
S1PR4O95977 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
S1PR4O95977 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
S1PR4O95977 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.86■■□□□ 1.09
S1PR4O95977 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
S1PR4O95977 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
S1PR4O95977 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.85■■□□□ 1.09
S1PR4O95977 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.85■■□□□ 1.09
S1PR4O95977 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.85■■□□□ 1.09
S1PR4O95977 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
S1PR4O95977 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.85■■□□□ 1.09
S1PR4O95977 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.85■■□□□ 1.09
S1PR4O95977 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
S1PR4O95977 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.85■■□□□ 1.09
S1PR4O95977 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
S1PR4O95977 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.84■■□□□ 1.09
S1PR4O95977 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
S1PR4O95977 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 AC008406.3-201ENST00000620001 1374 ntBASIC21.84■■□□□ 1.09
S1PR4O95977 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
S1PR4O95977 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
S1PR4O95977 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
S1PR4O95977 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
S1PR4O95977 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
S1PR4O95977 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.83■■□□□ 1.09
S1PR4O95977 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
S1PR4O95977 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
S1PR4O95977 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
S1PR4O95977 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
S1PR4O95977 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.82■■□□□ 1.08
S1PR4O95977 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
S1PR4O95977 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
S1PR4O95977 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR4O95977 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.82■■□□□ 1.08
S1PR4O95977 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.82■■□□□ 1.08
S1PR4O95977 pRNA.6-201ENST00000610482 90 ntBASIC21.82■■□□□ 1.08
S1PR4O95977 pRNA.5-201ENST00000612139 90 ntBASIC21.82■■□□□ 1.08
S1PR4O95977 pRNA.11-201ENST00000618423 90 ntBASIC21.82■■□□□ 1.08
S1PR4O95977 pRNA.13-201ENST00000619112 90 ntBASIC21.82■■□□□ 1.08
S1PR4O95977 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.82■■□□□ 1.08
S1PR4O95977 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR4O95977 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR4O95977 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR4O95977 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
S1PR4O95977 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.82■■□□□ 1.08
S1PR4O95977 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.81■■□□□ 1.08
S1PR4O95977 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.81■■□□□ 1.08
S1PR4O95977 AC133637.1-201ENST00000624115 1537 ntBASIC21.81■■□□□ 1.08
S1PR4O95977 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
S1PR4O95977 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 LINC00565-201ENST00000562710 2331 ntBASIC21.81■■□□□ 1.08
S1PR4O95977 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
S1PR4O95977 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.81■■□□□ 1.08
S1PR4O95977 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
S1PR4O95977 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
S1PR4O95977 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms