Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
SNRNP200O75643 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP200O75643 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.15■□□□□ 0.98
SNRNP200O75643 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SNRNP200O75643 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SNRNP200O75643 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP200O75643 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNRNP200O75643 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNRNP200O75643 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.14■□□□□ 0.98
SNRNP200O75643 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.98
SNRNP200O75643 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNRNP200O75643 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.14■□□□□ 0.98
SNRNP200O75643 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRNP200O75643 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.14■□□□□ 0.97
SNRNP200O75643 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.14■□□□□ 0.97
SNRNP200O75643 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRNP200O75643 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.14■□□□□ 0.97
SNRNP200O75643 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.14■□□□□ 0.97
SNRNP200O75643 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNRNP200O75643 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNRNP200O75643 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.14■□□□□ 0.97
SNRNP200O75643 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SNRNP200O75643 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SNRNP200O75643 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRNP200O75643 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.13■□□□□ 0.97
SNRNP200O75643 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SNRNP200O75643 IGHV3-19-201ENST00000521488 291 ntBASIC21.13■□□□□ 0.97
SNRNP200O75643 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRNP200O75643 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP200O75643 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP200O75643 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRNP200O75643 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRNP200O75643 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.13■□□□□ 0.97
SNRNP200O75643 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP200O75643 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP200O75643 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SNRNP200O75643 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.13■□□□□ 0.97
SNRNP200O75643 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.13■□□□□ 0.97
SNRNP200O75643 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP200O75643 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP200O75643 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP200O75643 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRNP200O75643 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRNP200O75643 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.12■□□□□ 0.97
SNRNP200O75643 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.12■□□□□ 0.97
SNRNP200O75643 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP200O75643 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP200O75643 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP200O75643 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SNRNP200O75643 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SNRNP200O75643 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.11■□□□□ 0.97
SNRNP200O75643 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SNRNP200O75643 MIR572-201ENST00000384983 95 ntBASIC21.11■□□□□ 0.97
SNRNP200O75643 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SNRNP200O75643 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.11■□□□□ 0.97
SNRNP200O75643 TSPY26P-201ENST00000476365 1326 ntBASIC21.11■□□□□ 0.97
SNRNP200O75643 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.11■□□□□ 0.97
SNRNP200O75643 AP005435.1-201ENST00000529293 1178 ntBASIC21.11■□□□□ 0.97
SNRNP200O75643 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 AL031602.1-201ENST00000633169 911 ntBASIC21.11■□□□□ 0.97
SNRNP200O75643 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.11■□□□□ 0.97
SNRNP200O75643 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.11■□□□□ 0.97
SNRNP200O75643 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SNRNP200O75643 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP200O75643 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.1■□□□□ 0.97
SNRNP200O75643 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP200O75643 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP200O75643 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP200O75643 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.1■□□□□ 0.97
SNRNP200O75643 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRNP200O75643 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SNRNP200O75643 AC087239.1-201ENST00000622671 572 ntBASIC21.1■□□□□ 0.97
SNRNP200O75643 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP200O75643 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SNRNP200O75643 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP200O75643 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.09■□□□□ 0.97
SNRNP200O75643 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP200O75643 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.09■□□□□ 0.97
SNRNP200O75643 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP200O75643 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP200O75643 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SNRNP200O75643 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.08■□□□□ 0.97
SNRNP200O75643 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP200O75643 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.08■□□□□ 0.97
SNRNP200O75643 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.08■□□□□ 0.97
SNRNP200O75643 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.08■□□□□ 0.97
SNRNP200O75643 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP200O75643 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms