Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.48■■■□□ 2.15
PTCD1O75127 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PTCD1O75127 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PTCD1O75127 AC004812.2-201ENST00000611079 2094 ntBASIC28.48■■■□□ 2.15
PTCD1O75127 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.48■■■□□ 2.15
PTCD1O75127 AC016769.1-201ENST00000409132 1010 ntBASIC28.48■■■□□ 2.15
PTCD1O75127 TK2-208ENST00000545043 1120 ntTSL 2 BASIC28.48■■■□□ 2.15
PTCD1O75127 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.48■■■□□ 2.15
PTCD1O75127 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.48■■■□□ 2.15
PTCD1O75127 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.48■■■□□ 2.15
PTCD1O75127 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PTCD1O75127 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PTCD1O75127 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
PTCD1O75127 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
PTCD1O75127 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.47■■■□□ 2.15
PTCD1O75127 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
PTCD1O75127 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.47■■■□□ 2.15
PTCD1O75127 LINC01124-201ENST00000409786 2117 ntBASIC28.47■■■□□ 2.15
PTCD1O75127 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.47■■■□□ 2.15
PTCD1O75127 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.47■■■□□ 2.15
PTCD1O75127 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
PTCD1O75127 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
PTCD1O75127 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PTCD1O75127 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PTCD1O75127 CDCA4P2-201ENST00000441182 718 ntBASIC28.46■■■□□ 2.15
PTCD1O75127 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.46■■■□□ 2.15
PTCD1O75127 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PTCD1O75127 RAP2CP1-201ENST00000605103 478 ntBASIC28.46■■■□□ 2.15
PTCD1O75127 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PTCD1O75127 BX005040.4-201ENST00000637145 1518 ntBASIC28.46■■■□□ 2.15
PTCD1O75127 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.46■■■□□ 2.15
PTCD1O75127 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
PTCD1O75127 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.46■■■□□ 2.15
PTCD1O75127 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PTCD1O75127 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.45■■■□□ 2.15
PTCD1O75127 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
PTCD1O75127 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
PTCD1O75127 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PTCD1O75127 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC28.45■■■□□ 2.14
PTCD1O75127 AC073111.5-205ENST00000641717 521 ntBASIC28.45■■■□□ 2.14
PTCD1O75127 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PTCD1O75127 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PTCD1O75127 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
PTCD1O75127 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.44■■■□□ 2.14
PTCD1O75127 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.44■■■□□ 2.14
PTCD1O75127 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.44■■■□□ 2.14
PTCD1O75127 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PTCD1O75127 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PTCD1O75127 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.44■■■□□ 2.14
PTCD1O75127 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PTCD1O75127 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PTCD1O75127 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
PTCD1O75127 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PTCD1O75127 AL353803.4-201ENST00000565882 1934 ntBASIC28.43■■■□□ 2.14
PTCD1O75127 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PTCD1O75127 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PTCD1O75127 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PTCD1O75127 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
PTCD1O75127 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.42■■■□□ 2.14
PTCD1O75127 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PTCD1O75127 LINC00543-201ENST00000567234 1845 ntBASIC28.42■■■□□ 2.14
PTCD1O75127 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PTCD1O75127 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.42■■■□□ 2.14
PTCD1O75127 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.42■■■□□ 2.14
PTCD1O75127 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
PTCD1O75127 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
PTCD1O75127 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
PTCD1O75127 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PTCD1O75127 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PTCD1O75127 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.41■■■□□ 2.14
PTCD1O75127 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PTCD1O75127 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PTCD1O75127 HSCB-202ENST00000398941 955 ntTSL 2 BASIC28.41■■■□□ 2.14
PTCD1O75127 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.41■■■□□ 2.14
PTCD1O75127 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PTCD1O75127 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.41■■■□□ 2.14
PTCD1O75127 SMUG1P1-201ENST00000590640 811 ntBASIC28.41■■■□□ 2.14
PTCD1O75127 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PTCD1O75127 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
PTCD1O75127 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PTCD1O75127 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PTCD1O75127 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PTCD1O75127 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.4■■■□□ 2.14
PTCD1O75127 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PTCD1O75127 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.4■■■□□ 2.14
PTCD1O75127 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.4■■■□□ 2.14
PTCD1O75127 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.4■■■□□ 2.14
PTCD1O75127 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.4■■■□□ 2.14
PTCD1O75127 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PTCD1O75127 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.4■■■□□ 2.14
PTCD1O75127 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
PTCD1O75127 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.39■■■□□ 2.14
PTCD1O75127 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PTCD1O75127 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.38■■■□□ 2.13
PTCD1O75127 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC28.38■■■□□ 2.13
PTCD1O75127 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.38■■■□□ 2.13
PTCD1O75127 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.38■■■□□ 2.13
PTCD1O75127 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PTCD1O75127 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PTCD1O75127 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms