Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ALDH1A3-203ENST00000557963 1670 ntBASIC27.25■■□□□ 1.95
GRIN3BO60391 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
GRIN3BO60391 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
GRIN3BO60391 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
GRIN3BO60391 UBE2DNL-204ENST00000602536 740 ntBASIC27.25■■□□□ 1.95
GRIN3BO60391 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
GRIN3BO60391 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.25■■□□□ 1.95
GRIN3BO60391 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.24■■□□□ 1.95
GRIN3BO60391 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
GRIN3BO60391 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC27.24■■□□□ 1.95
GRIN3BO60391 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
GRIN3BO60391 ESRRAP1-201ENST00000400596 1257 ntBASIC27.24■■□□□ 1.95
GRIN3BO60391 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.24■■□□□ 1.95
GRIN3BO60391 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.24■■□□□ 1.95
GRIN3BO60391 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.24■■□□□ 1.95
GRIN3BO60391 MIR6089-201ENST00000616698 64 ntBASIC27.24■■□□□ 1.95
GRIN3BO60391 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.24■■□□□ 1.95
GRIN3BO60391 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.24■■□□□ 1.95
GRIN3BO60391 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.23■■□□□ 1.95
GRIN3BO60391 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
GRIN3BO60391 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
GRIN3BO60391 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
GRIN3BO60391 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
GRIN3BO60391 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
GRIN3BO60391 AC104187.1-201ENST00000607510 612 ntBASIC27.23■■□□□ 1.95
GRIN3BO60391 AC010331.1-201ENST00000611423 582 ntBASIC27.23■■□□□ 1.95
GRIN3BO60391 AC092118.2-201ENST00000613495 667 ntBASIC27.23■■□□□ 1.95
GRIN3BO60391 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.23■■□□□ 1.95
GRIN3BO60391 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
GRIN3BO60391 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.22■■□□□ 1.95
GRIN3BO60391 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.22■■□□□ 1.95
GRIN3BO60391 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
GRIN3BO60391 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
GRIN3BO60391 BRI3-207ENST00000539286 699 ntTSL 2 BASIC27.22■■□□□ 1.95
GRIN3BO60391 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC27.22■■□□□ 1.95
GRIN3BO60391 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
GRIN3BO60391 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
GRIN3BO60391 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
GRIN3BO60391 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
GRIN3BO60391 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.21■■□□□ 1.95
GRIN3BO60391 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
GRIN3BO60391 MYCNOS-205ENST00000641950 531 ntBASIC27.21■■□□□ 1.95
GRIN3BO60391 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
GRIN3BO60391 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
GRIN3BO60391 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
GRIN3BO60391 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.2■■□□□ 1.95
GRIN3BO60391 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
GRIN3BO60391 CNN2P6-201ENST00000439038 900 ntBASIC27.2■■□□□ 1.94
GRIN3BO60391 UNC93B4-201ENST00000505679 747 ntBASIC27.2■■□□□ 1.94
GRIN3BO60391 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
GRIN3BO60391 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.19■■□□□ 1.94
GRIN3BO60391 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
GRIN3BO60391 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
GRIN3BO60391 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.19■■□□□ 1.94
GRIN3BO60391 MIPEPP3-201ENST00000412105 444 ntBASIC27.19■■□□□ 1.94
GRIN3BO60391 ECEL1P3-201ENST00000427961 737 ntBASIC27.19■■□□□ 1.94
GRIN3BO60391 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.19■■□□□ 1.94
GRIN3BO60391 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.19■■□□□ 1.94
GRIN3BO60391 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
GRIN3BO60391 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3BO60391 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3BO60391 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3BO60391 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC27.18■■□□□ 1.94
GRIN3BO60391 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
GRIN3BO60391 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3BO60391 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.18■■□□□ 1.94
GRIN3BO60391 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3BO60391 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3BO60391 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
GRIN3BO60391 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.17■■□□□ 1.94
GRIN3BO60391 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3BO60391 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3BO60391 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
GRIN3BO60391 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3BO60391 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3BO60391 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.17■■□□□ 1.94
GRIN3BO60391 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3BO60391 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.17■■□□□ 1.94
GRIN3BO60391 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
GRIN3BO60391 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
GRIN3BO60391 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
GRIN3BO60391 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC27.16■■□□□ 1.94
GRIN3BO60391 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.16■■□□□ 1.94
GRIN3BO60391 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
GRIN3BO60391 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.16■■□□□ 1.94
GRIN3BO60391 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.16■■□□□ 1.94
GRIN3BO60391 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.16■■□□□ 1.94
GRIN3BO60391 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.16■■□□□ 1.94
GRIN3BO60391 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
GRIN3BO60391 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
GRIN3BO60391 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
GRIN3BO60391 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
GRIN3BO60391 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
GRIN3BO60391 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
GRIN3BO60391 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.15■■□□□ 1.94
GRIN3BO60391 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC27.15■■□□□ 1.94
GRIN3BO60391 AC006058.3-201ENST00000606217 1069 ntBASIC27.15■■□□□ 1.94
GRIN3BO60391 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
GRIN3BO60391 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
GRIN3BO60391 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms