Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 AC008406.3-201ENST00000620001 1374 ntBASIC19.59■□□□□ 0.73
TRAF3IP2O43734 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF3IP2O43734 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TRAF3IP2O43734 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP2O43734 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP2O43734 AC127496.7-201ENST00000625110 1798 ntBASIC19.58■□□□□ 0.73
TRAF3IP2O43734 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP2O43734 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP2O43734 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 AC011298.3-201ENST00000615796 283 ntBASIC19.57■□□□□ 0.72
TRAF3IP2O43734 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP2O43734 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 OR2I1P-207ENST00000453522 948 ntBASIC19.56■□□□□ 0.72
TRAF3IP2O43734 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 AC136469.2-201ENST00000623944 1028 ntBASIC19.56■□□□□ 0.72
TRAF3IP2O43734 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP2O43734 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 GUSBP5-202ENST00000510805 1989 ntBASIC19.55■□□□□ 0.72
TRAF3IP2O43734 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP2O43734 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 AL117328.2-201ENST00000624617 1940 ntBASIC19.54■□□□□ 0.72
TRAF3IP2O43734 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP2O43734 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms