Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFB3O43676 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFB3O43676 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFB3O43676 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFB3O43676 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.32■□□□□ 0.52
NDUFB3O43676 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.32■□□□□ 0.52
NDUFB3O43676 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.32■□□□□ 0.52
NDUFB3O43676 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NDUFB3O43676 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFB3O43676 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFB3O43676 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFB3O43676 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFB3O43676 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFB3O43676 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFB3O43676 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFB3O43676 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFB3O43676 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFB3O43676 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFB3O43676 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NDUFB3O43676 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NDUFB3O43676 BX842568.3-201ENST00000418104 571 ntBASIC18.31■□□□□ 0.52
NDUFB3O43676 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.31■□□□□ 0.52
NDUFB3O43676 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFB3O43676 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFB3O43676 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NDUFB3O43676 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NDUFB3O43676 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFB3O43676 MIR638-201ENST00000385237 100 ntBASIC18.3■□□□□ 0.52
NDUFB3O43676 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFB3O43676 AC142381.2-201ENST00000566120 298 ntBASIC18.3■□□□□ 0.52
NDUFB3O43676 AC008764.7-201ENST00000593779 1081 ntBASIC18.3■□□□□ 0.52
NDUFB3O43676 AC233992.3-201ENST00000607491 485 ntBASIC18.3■□□□□ 0.52
NDUFB3O43676 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFB3O43676 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFB3O43676 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NDUFB3O43676 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFB3O43676 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFB3O43676 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NDUFB3O43676 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.29■□□□□ 0.52
NDUFB3O43676 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFB3O43676 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFB3O43676 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 SLC47A1P1-202ENST00000449666 945 ntBASIC18.29■□□□□ 0.52
NDUFB3O43676 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFB3O43676 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 AC027682.1-201ENST00000562846 899 ntBASIC18.29■□□□□ 0.52
NDUFB3O43676 AC005837.3-201ENST00000612163 286 ntBASIC18.29■□□□□ 0.52
NDUFB3O43676 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDUFB3O43676 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFB3O43676 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NDUFB3O43676 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NDUFB3O43676 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFB3O43676 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.28■□□□□ 0.52
NDUFB3O43676 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 AC068587.7-201ENST00000641602 218 ntBASIC18.28■□□□□ 0.52
NDUFB3O43676 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.28■□□□□ 0.52
NDUFB3O43676 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFB3O43676 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFB3O43676 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.27■□□□□ 0.52
NDUFB3O43676 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NDUFB3O43676 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NDUFB3O43676 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NDUFB3O43676 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFB3O43676 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.27■□□□□ 0.52
NDUFB3O43676 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.27■□□□□ 0.52
NDUFB3O43676 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.27■□□□□ 0.52
NDUFB3O43676 AF213884.3-201ENST00000563833 479 ntBASIC18.27■□□□□ 0.52
NDUFB3O43676 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFB3O43676 AC126544.1-201ENST00000580842 1059 ntBASIC18.27■□□□□ 0.52
NDUFB3O43676 AC010525.1-201ENST00000585559 441 ntBASIC18.27■□□□□ 0.52
NDUFB3O43676 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.27■□□□□ 0.52
NDUFB3O43676 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.27■□□□□ 0.52
NDUFB3O43676 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFB3O43676 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NDUFB3O43676 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFB3O43676 PKD1P6-201ENST00000343738 4769 ntBASIC18.26■□□□□ 0.51
NDUFB3O43676 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFB3O43676 AC099791.1-201ENST00000416440 715 ntBASIC18.26■□□□□ 0.51
NDUFB3O43676 AP001330.3-201ENST00000520123 633 ntBASIC18.26■□□□□ 0.51
NDUFB3O43676 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.26■□□□□ 0.51
NDUFB3O43676 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.26■□□□□ 0.51
NDUFB3O43676 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFB3O43676 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFB3O43676 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFB3O43676 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms