Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PHF1O43189 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.87■□□□□ 0.61
PHF1O43189 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.86■□□□□ 0.61
PHF1O43189 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PHF1O43189 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.86■□□□□ 0.61
PHF1O43189 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.86■□□□□ 0.61
PHF1O43189 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.86■□□□□ 0.61
PHF1O43189 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PHF1O43189 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF1O43189 ALDH1A3-203ENST00000557963 1670 ntBASIC18.85■□□□□ 0.61
PHF1O43189 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.85■□□□□ 0.61
PHF1O43189 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 DUSP8P3-201ENST00000399571 1760 ntBASIC18.85■□□□□ 0.61
PHF1O43189 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PHF1O43189 C1orf229-201ENST00000623686 2258 ntBASIC18.85■□□□□ 0.61
PHF1O43189 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PHF1O43189 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.85■□□□□ 0.61
PHF1O43189 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHF1O43189 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHF1O43189 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF1O43189 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF1O43189 AC092068.2-201ENST00000590491 1708 ntBASIC18.84■□□□□ 0.61
PHF1O43189 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.84■□□□□ 0.61
PHF1O43189 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PHF1O43189 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.84■□□□□ 0.61
PHF1O43189 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.84■□□□□ 0.61
PHF1O43189 LINC00565-201ENST00000562710 2331 ntBASIC18.84■□□□□ 0.61
PHF1O43189 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PHF1O43189 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.84■□□□□ 0.61
PHF1O43189 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHF1O43189 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHF1O43189 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF1O43189 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF1O43189 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF1O43189 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF1O43189 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF1O43189 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF1O43189 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF1O43189 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF1O43189 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF1O43189 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PHF1O43189 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 AC009102.2-201ENST00000606772 1639 ntBASIC18.82■□□□□ 0.6
PHF1O43189 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF1O43189 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PHF1O43189 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF1O43189 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF1O43189 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PHF1O43189 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF1O43189 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF1O43189 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PHF1O43189 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms