Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.44■■□□□ 1.02
PPM1DO15297 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PPM1DO15297 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PPM1DO15297 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.43■■□□□ 1.02
PPM1DO15297 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PPM1DO15297 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.43■■□□□ 1.02
PPM1DO15297 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.43■■□□□ 1.02
PPM1DO15297 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PPM1DO15297 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPM1DO15297 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PPM1DO15297 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.42■■□□□ 1.02
PPM1DO15297 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.42■■□□□ 1.02
PPM1DO15297 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PPM1DO15297 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.42■■□□□ 1.02
PPM1DO15297 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PPM1DO15297 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.42■■□□□ 1.02
PPM1DO15297 AC027612.3-201ENST00000413684 1047 ntBASIC21.42■■□□□ 1.02
PPM1DO15297 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
PPM1DO15297 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.42■■□□□ 1.02
PPM1DO15297 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.42■■□□□ 1.02
PPM1DO15297 AL354811.1-201ENST00000610286 706 ntBASIC21.42■■□□□ 1.02
PPM1DO15297 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPM1DO15297 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.41■■□□□ 1.02
PPM1DO15297 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.41■■□□□ 1.02
PPM1DO15297 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPM1DO15297 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPM1DO15297 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPM1DO15297 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPM1DO15297 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.41■■□□□ 1.02
PPM1DO15297 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPM1DO15297 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPM1DO15297 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.4■■□□□ 1.02
PPM1DO15297 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPM1DO15297 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPM1DO15297 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
PPM1DO15297 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPM1DO15297 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.4■■□□□ 1.02
PPM1DO15297 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.4■■□□□ 1.02
PPM1DO15297 AC034268.1-201ENST00000441047 882 ntBASIC21.4■■□□□ 1.02
PPM1DO15297 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.4■■□□□ 1.02
PPM1DO15297 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPM1DO15297 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PPM1DO15297 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PPM1DO15297 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
PPM1DO15297 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PPM1DO15297 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.4■■□□□ 1.02
PPM1DO15297 C9orf163-202ENST00000624034 2573 ntBASIC21.4■■□□□ 1.02
PPM1DO15297 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PPM1DO15297 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PPM1DO15297 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PPM1DO15297 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.39■■□□□ 1.02
PPM1DO15297 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.39■■□□□ 1.01
PPM1DO15297 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PPM1DO15297 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.39■■□□□ 1.01
PPM1DO15297 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPM1DO15297 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.38■■□□□ 1.01
PPM1DO15297 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPM1DO15297 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPM1DO15297 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PPM1DO15297 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PPM1DO15297 AC123595.1-201ENST00000440769 1046 ntBASIC21.38■■□□□ 1.01
PPM1DO15297 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.38■■□□□ 1.01
PPM1DO15297 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.38■■□□□ 1.01
PPM1DO15297 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.38■■□□□ 1.01
PPM1DO15297 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPM1DO15297 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPM1DO15297 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.38■■□□□ 1.01
PPM1DO15297 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPM1DO15297 AC092068.2-201ENST00000590491 1708 ntBASIC21.38■■□□□ 1.01
PPM1DO15297 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PPM1DO15297 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.37■■□□□ 1.01
PPM1DO15297 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.37■■□□□ 1.01
PPM1DO15297 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.37■■□□□ 1.01
PPM1DO15297 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPM1DO15297 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPM1DO15297 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPM1DO15297 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPM1DO15297 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.37■■□□□ 1.01
PPM1DO15297 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.37■■□□□ 1.01
PPM1DO15297 DUX4L2-201ENST00000561772 1275 ntBASIC21.37■■□□□ 1.01
PPM1DO15297 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.37■■□□□ 1.01
PPM1DO15297 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.37■■□□□ 1.01
PPM1DO15297 DUX4L6-201ENST00000626483 1275 ntBASIC21.37■■□□□ 1.01
PPM1DO15297 DUX4L1-201ENST00000627662 1275 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms