Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.28■□□□□ 0.84
TO15178 AC010525.1-201ENST00000585559 441 ntBASIC20.28■□□□□ 0.84
TO15178 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.28■□□□□ 0.84
TO15178 AC233992.3-201ENST00000607491 485 ntBASIC20.28■□□□□ 0.84
TO15178 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.28■□□□□ 0.84
TO15178 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
TO15178 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.28■□□□□ 0.84
TO15178 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TO15178 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TO15178 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TO15178 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TO15178 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TO15178 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TO15178 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TO15178 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TO15178 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TO15178 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.27■□□□□ 0.84
TO15178 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.27■□□□□ 0.84
TO15178 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.27■□□□□ 0.84
TO15178 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
TO15178 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TO15178 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TO15178 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TO15178 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TO15178 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.27■□□□□ 0.83
TO15178 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TO15178 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
TO15178 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TO15178 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TO15178 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TO15178 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TO15178 MIR638-201ENST00000385237 100 ntBASIC20.26■□□□□ 0.83
TO15178 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TO15178 SUDS3P1-201ENST00000505831 966 ntBASIC20.26■□□□□ 0.83
TO15178 AP001330.3-201ENST00000520123 633 ntBASIC20.26■□□□□ 0.83
TO15178 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TO15178 LINC01960-201ENST00000563759 1884 ntBASIC20.25■□□□□ 0.83
TO15178 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 AP005435.1-201ENST00000529293 1178 ntBASIC20.25■□□□□ 0.83
TO15178 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.25■□□□□ 0.83
TO15178 AC027682.1-201ENST00000562846 899 ntBASIC20.25■□□□□ 0.83
TO15178 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.25■□□□□ 0.83
TO15178 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TO15178 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.25■□□□□ 0.83
TO15178 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TO15178 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TO15178 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
TO15178 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TO15178 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.24■□□□□ 0.83
TO15178 C9orf163-202ENST00000624034 2573 ntBASIC20.24■□□□□ 0.83
TO15178 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TO15178 ESRRAP2-201ENST00000418437 1549 ntBASIC20.24■□□□□ 0.83
TO15178 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TO15178 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TO15178 MIR939-201ENST00000401314 82 ntBASIC20.24■□□□□ 0.83
TO15178 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.24■□□□□ 0.83
TO15178 AC005837.3-201ENST00000612163 286 ntBASIC20.24■□□□□ 0.83
TO15178 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.24■□□□□ 0.83
TO15178 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
TO15178 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TO15178 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.24■□□□□ 0.83
TO15178 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TO15178 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TO15178 AC068473.5-201ENST00000616428 2072 ntBASIC20.23■□□□□ 0.83
TO15178 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TO15178 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TO15178 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.23■□□□□ 0.83
TO15178 AF213884.3-201ENST00000563833 479 ntBASIC20.23■□□□□ 0.83
TO15178 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.23■□□□□ 0.83
TO15178 AL136967.2-201ENST00000623968 743 ntBASIC20.23■□□□□ 0.83
TO15178 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.23■□□□□ 0.83
TO15178 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TO15178 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TO15178 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TO15178 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TO15178 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TO15178 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TO15178 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TO15178 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TO15178 AC091305.1-201ENST00000479476 895 ntBASIC20.22■□□□□ 0.83
TO15178 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.22■□□□□ 0.83
TO15178 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.22■□□□□ 0.83
TO15178 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TO15178 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
TO15178 RASA4CP-201ENST00000424092 1398 ntBASIC20.21■□□□□ 0.83
TO15178 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TO15178 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TO15178 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms