Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH17O14917 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
PCDH17O14917 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH17O14917 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PCDH17O14917 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDH17O14917 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH17O14917 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH17O14917 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.94■□□□□ 0.94
PCDH17O14917 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH17O14917 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDH17O14917 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH17O14917 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH17O14917 AL499627.2-201ENST00000606283 725 ntBASIC20.93■□□□□ 0.94
PCDH17O14917 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH17O14917 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH17O14917 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH17O14917 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH17O14917 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH17O14917 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH17O14917 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH17O14917 RARRES2P6-201ENST00000567333 442 ntBASIC20.92■□□□□ 0.94
PCDH17O14917 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH17O14917 AC233992.3-201ENST00000607491 485 ntBASIC20.92■□□□□ 0.94
PCDH17O14917 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDH17O14917 AC144652.1-201ENST00000609974 1624 ntBASIC20.92■□□□□ 0.94
PCDH17O14917 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH17O14917 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH17O14917 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH17O14917 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH17O14917 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDH17O14917 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH17O14917 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH17O14917 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH17O14917 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH17O14917 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH17O14917 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDH17O14917 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH17O14917 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDH17O14917 LINC01529-204ENST00000636474 1715 ntBASIC20.9■□□□□ 0.94
PCDH17O14917 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH17O14917 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH17O14917 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH17O14917 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH17O14917 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH17O14917 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH17O14917 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH17O14917 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH17O14917 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH17O14917 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH17O14917 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH17O14917 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH17O14917 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH17O14917 CA15P2-201ENST00000611168 834 ntBASIC20.89■□□□□ 0.93
PCDH17O14917 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH17O14917 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH17O14917 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH17O14917 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH17O14917 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PCDH17O14917 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH17O14917 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH17O14917 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PCDH17O14917 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH17O14917 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDH17O14917 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH17O14917 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
PCDH17O14917 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms