Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.18■■■□□ 2.58
CHD2O14647 UBE2DNL-204ENST00000602536 740 ntBASIC31.18■■■□□ 2.58
CHD2O14647 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD2O14647 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHD2O14647 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.17■■■□□ 2.58
CHD2O14647 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.17■■■□□ 2.58
CHD2O14647 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.17■■■□□ 2.58
CHD2O14647 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD2O14647 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHD2O14647 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC31.16■■■□□ 2.58
CHD2O14647 AC068587.7-201ENST00000641602 218 ntBASIC31.16■■■□□ 2.58
CHD2O14647 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHD2O14647 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD2O14647 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD2O14647 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.15■■■□□ 2.58
CHD2O14647 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD2O14647 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.15■■■□□ 2.58
CHD2O14647 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHD2O14647 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CHD2O14647 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD2O14647 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD2O14647 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.14■■■□□ 2.58
CHD2O14647 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
CHD2O14647 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD2O14647 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.14■■■□□ 2.58
CHD2O14647 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.14■■■□□ 2.58
CHD2O14647 AC079140.4-201ENST00000507448 529 ntBASIC31.14■■■□□ 2.58
CHD2O14647 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD2O14647 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHD2O14647 AC104187.1-201ENST00000607510 612 ntBASIC31.13■■■□□ 2.57
CHD2O14647 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CHD2O14647 AC083906.2-201ENST00000511578 360 ntBASIC31.12■■■□□ 2.57
CHD2O14647 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.12■■■□□ 2.57
CHD2O14647 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.12■■■□□ 2.57
CHD2O14647 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CHD2O14647 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CHD2O14647 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.12■■■□□ 2.57
CHD2O14647 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
CHD2O14647 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.11■■■□□ 2.57
CHD2O14647 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD2O14647 KRT87P-202ENST00000534226 1464 ntBASIC31.11■■■□□ 2.57
CHD2O14647 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.11■■■□□ 2.57
CHD2O14647 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.11■■■□□ 2.57
CHD2O14647 SLC29A4P1-201ENST00000398760 971 ntBASIC31.1■■■□□ 2.57
CHD2O14647 CNN2P6-201ENST00000439038 900 ntBASIC31.1■■■□□ 2.57
CHD2O14647 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.1■■■□□ 2.57
CHD2O14647 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD2O14647 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHD2O14647 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.1■■■□□ 2.57
CHD2O14647 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CHD2O14647 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.09■■■□□ 2.57
CHD2O14647 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHD2O14647 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.09■■■□□ 2.57
CHD2O14647 DET1-205ENST00000558413 583 ntTSL 4 BASIC31.09■■■□□ 2.57
CHD2O14647 AC087239.1-201ENST00000622671 572 ntBASIC31.09■■■□□ 2.57
CHD2O14647 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHD2O14647 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD2O14647 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD2O14647 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.08■■■□□ 2.57
CHD2O14647 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD2O14647 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.08■■■□□ 2.57
CHD2O14647 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.08■■■□□ 2.57
CHD2O14647 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHD2O14647 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD2O14647 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CHD2O14647 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC31.08■■■□□ 2.57
CHD2O14647 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CHD2O14647 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CHD2O14647 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.07■■■□□ 2.56
CHD2O14647 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.07■■■□□ 2.56
CHD2O14647 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD2O14647 AC005181.1-201ENST00000604782 1256 ntBASIC31.07■■■□□ 2.56
CHD2O14647 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHD2O14647 AC073210.2-201ENST00000430369 194 ntBASIC31.06■■■□□ 2.56
CHD2O14647 AC008687.6-201ENST00000596318 630 ntBASIC31.06■■■□□ 2.56
CHD2O14647 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD2O14647 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHD2O14647 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.05■■■□□ 2.56
CHD2O14647 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CHD2O14647 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD2O14647 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD2O14647 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD2O14647 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.05■■■□□ 2.56
CHD2O14647 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.05■■■□□ 2.56
CHD2O14647 MYCNOS-205ENST00000641950 531 ntBASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms