Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMX2-CTNND1H3BSU7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TMX2-CTNND1H3BSU7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.52■■□□□ 1.03
TMX2-CTNND1H3BSU7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 MIR572-201ENST00000384983 95 ntBASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 AC027612.3-201ENST00000413684 1047 ntBASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 SLC47A1P1-202ENST00000449666 945 ntBASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 AL354811.1-201ENST00000610286 706 ntBASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TMX2-CTNND1H3BSU7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.5■■□□□ 1.03
TMX2-CTNND1H3BSU7 FP325331.1-202ENST00000623531 1380 ntBASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 AL117328.2-201ENST00000624617 1940 ntBASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
TMX2-CTNND1H3BSU7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 AL137784.2-201ENST00000607332 1000 ntBASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 AC133637.1-201ENST00000624115 1537 ntBASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMX2-CTNND1H3BSU7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 AC022517.1-201ENST00000592429 346 ntBASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 AL499627.2-201ENST00000606283 725 ntBASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMX2-CTNND1H3BSU7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMX2-CTNND1H3BSU7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
TMX2-CTNND1H3BSU7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.45■■□□□ 1.02
TMX2-CTNND1H3BSU7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
TMX2-CTNND1H3BSU7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMX2-CTNND1H3BSU7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TMX2-CTNND1H3BSU7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
TMX2-CTNND1H3BSU7 AP003733.4-201ENST00000623785 1697 ntBASIC21.44■■□□□ 1.02
TMX2-CTNND1H3BSU7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMX2-CTNND1H3BSU7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMX2-CTNND1H3BSU7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TMX2-CTNND1H3BSU7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
TMX2-CTNND1H3BSU7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms