Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRAMEF25A6NGN4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF25A6NGN4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF25A6NGN4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 AC139530.1-201ENST00000575312 1977 ntBASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 C17orf82-201ENST00000623772 1530 ntBASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF25A6NGN4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF25A6NGN4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 AC137767.1-201ENST00000602918 1920 ntBASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF25A6NGN4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 AC007375.3-201ENST00000600936 2314 ntBASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PRAMEF25A6NGN4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 AC080038.3-201ENST00000623346 1952 ntBASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF25A6NGN4 AC087742.1-201ENST00000575880 1738 ntBASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF25A6NGN4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF25A6NGN4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF25A6NGN4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.58■□□□□ 0.88
PRAMEF25A6NGN4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF25A6NGN4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF25A6NGN4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF25A6NGN4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms