Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM235A6NFC5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 AC010542.4-201ENST00000563151 1910 ntBASIC18.72■□□□□ 0.59
TMEM235A6NFC5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM235A6NFC5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 THA1P-201ENST00000590384 1145 ntBASIC18.71■□□□□ 0.59
TMEM235A6NFC5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM235A6NFC5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TMEM235A6NFC5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TMEM235A6NFC5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 DUX4L18-201ENST00000553347 1267 ntBASIC18.7■□□□□ 0.58
TMEM235A6NFC5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM235A6NFC5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEM235A6NFC5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 KRT18P24-201ENST00000344739 1156 ntBASIC18.68■□□□□ 0.58
TMEM235A6NFC5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMEM235A6NFC5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms