Protein–RNA interactions for Protein: A2RUT3

TMEM89, Transmembrane protein 89, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM89A2RUT3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM89A2RUT3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 AL355802.2-201ENST00000402069 882 ntBASIC17.56■□□□□ 0.4
TMEM89A2RUT3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM89A2RUT3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TMEM89A2RUT3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 NCF1B-203ENST00000435988 1254 ntBASIC17.54■□□□□ 0.4
TMEM89A2RUT3 CROCCP5-201ENST00000436658 830 ntBASIC17.54■□□□□ 0.4
TMEM89A2RUT3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM89A2RUT3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 AP004607.4-201ENST00000530158 1459 ntBASIC17.53■□□□□ 0.4
TMEM89A2RUT3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM89A2RUT3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 TPRG1LP1-201ENST00000598702 760 ntBASIC17.52■□□□□ 0.4
TMEM89A2RUT3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM89A2RUT3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM89A2RUT3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM89A2RUT3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM89A2RUT3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM89A2RUT3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TMEM89A2RUT3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM89A2RUT3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM89A2RUT3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms