Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ESRRAP2-201ENST00000418437 1549 ntBASIC21.09■□□□□ 0.97
RNF103-CHMP3A0A140T963 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF103-CHMP3A0A140T963 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.08■□□□□ 0.97
RNF103-CHMP3A0A140T963 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF103-CHMP3A0A140T963 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
RNF103-CHMP3A0A140T963 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF103-CHMP3A0A140T963 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.08■□□□□ 0.96
RNF103-CHMP3A0A140T963 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF103-CHMP3A0A140T963 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF103-CHMP3A0A140T963 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 BX664725.1-201ENST00000438252 379 ntBASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF103-CHMP3A0A140T963 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 AC021242.3-201ENST00000607598 1377 ntBASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF103-CHMP3A0A140T963 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF103-CHMP3A0A140T963 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF103-CHMP3A0A140T963 AL353803.4-201ENST00000565882 1934 ntBASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF103-CHMP3A0A140T963 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF103-CHMP3A0A140T963 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF103-CHMP3A0A140T963 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF103-CHMP3A0A140T963 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms