Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC127496.7-201ENST00000625110 1798 ntBASIC21.77■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC010525.1-201ENST00000585559 441 ntBASIC21.77■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC106739.1-201ENST00000617035 715 ntBASIC21.77■■□□□ 1.08
TRBV5-4A0A0C4DH59 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV5-4A0A0C4DH59 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBV5-4A0A0C4DH59 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRBV5-4A0A0C4DH59 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRBV5-4A0A0C4DH59 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 CA15P2-201ENST00000611168 834 ntBASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBV5-4A0A0C4DH59 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 SLC47A1P1-202ENST00000449666 945 ntBASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV5-4A0A0C4DH59 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 AC233723.2-201ENST00000623798 2106 ntBASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRBV5-4A0A0C4DH59 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 PBX2P1-201ENST00000493219 1291 ntBASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV5-4A0A0C4DH59 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 BX842568.3-201ENST00000418104 571 ntBASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 AL139246.5-201ENST00000606645 996 ntBASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 AC068587.7-201ENST00000641602 218 ntBASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRBV5-4A0A0C4DH59 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV5-4A0A0C4DH59 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TRBV5-4A0A0C4DH59 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRBV5-4A0A0C4DH59 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 EDA-201ENST00000338901 1233 ntBASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC133561.4-201ENST00000566112 224 ntBASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TRBV5-4A0A0C4DH59 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV5-4A0A0C4DH59 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV5-4A0A0C4DH59 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms