Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 TPRG1LP1-201ENST00000598702 760 ntBASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV17A0A0B4J275 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 AL139125.2-201ENST00000623134 1869 ntBASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 BX005040.4-201ENST00000637145 1518 ntBASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV17A0A0B4J275 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV17A0A0B4J275 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV17A0A0B4J275 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV17A0A0B4J275 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV17A0A0B4J275 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV17A0A0B4J275 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV17A0A0B4J275 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 AC016769.1-201ENST00000409132 1010 ntBASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV17A0A0B4J275 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 AC137761.2-201ENST00000561729 223 ntBASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 AC145350.3-201ENST00000569033 163 ntBASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV17A0A0B4J275 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 SMUG1P1-201ENST00000590640 811 ntBASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms