Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 LINC00526-201ENST00000581067 1875 ntBASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV12-3A0A0B4J271 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 ECEL1P1-201ENST00000373592 1742 ntBASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 AC009102.2-201ENST00000606772 1639 ntBASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-3A0A0B4J271 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 AC242852.2-201ENST00000615738 1807 ntBASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-3A0A0B4J271 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-3A0A0B4J271 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-3A0A0B4J271 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-3A0A0B4J271 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-3A0A0B4J271 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 AC009086.3-201ENST00000623486 1008 ntBASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 LINC00565-201ENST00000562710 2331 ntBASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-3A0A0B4J271 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 DUX4L4-201ENST00000566884 1269 ntBASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 AC127496.7-201ENST00000625110 1798 ntBASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-3A0A0B4J271 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms