Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV12-1A0A0B4J245 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV12-1A0A0B4J245 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV12-1A0A0B4J245 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 AC138932.1-201ENST00000534164 6830 ntBASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 AC093536.1-201ENST00000569153 554 ntBASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-1A0A0B4J245 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 AL157384.1-201ENST00000445995 2473 ntBASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-1A0A0B4J245 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms