Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAV10A0A0B4J240 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV10A0A0B4J240 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV10A0A0B4J240 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
TRAV10A0A0B4J240 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAV10A0A0B4J240 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRAV10A0A0B4J240 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRAV10A0A0B4J240 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV10A0A0B4J240 AL353803.4-201ENST00000565882 1934 ntBASIC15.52■□□□□ 0.07
TRAV10A0A0B4J240 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV10A0A0B4J240 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV10A0A0B4J240 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 ABCB10P4-201ENST00000566803 2184 ntBASIC15.51■□□□□ 0.07
TRAV10A0A0B4J240 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 LINC02228-203ENST00000641970 1355 ntBASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 AC093323.1-202ENST00000635031 2045 ntBASIC15.5■□□□□ 0.07
TRAV10A0A0B4J240 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV10A0A0B4J240 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV10A0A0B4J240 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 AC010141.3-201ENST00000456659 717 ntBASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 CCDC92B-201ENST00000575506 885 ntBASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms