Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-2A0A075B6T6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV12-2A0A075B6T6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 AL356441.2-201ENST00000443009 864 ntBASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-2A0A075B6T6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV12-2A0A075B6T6 ESRRAP2-201ENST00000418437 1549 ntBASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV12-2A0A075B6T6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 MIR3621-201ENST00000580529 85 ntBASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-2A0A075B6T6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 LINC01960-201ENST00000563759 1884 ntBASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-2A0A075B6T6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms