Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 PKMP1-201ENST00000455804 1523 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 MIR566-201ENST00000385187 94 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AL121574.1-201ENST00000415890 419 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AC083873.1-201ENST00000421179 1099 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 OR51A9P-201ENST00000422578 911 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 HLA-W-207ENST00000439514 771 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 RNU1-80P-201ENST00000459500 161 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AC024293.1-201ENST00000467930 498 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AC113340.1-201ENST00000475257 636 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 RPL29P2-201ENST00000488409 460 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AP001102.1-201ENST00000528959 409 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 DDX11L8-201ENST00000535849 366 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 FOXD2-AS1-201ENST00000445551 2509 ntBASIC13.86□□□□□ -0.19
LMO3Q8TAP4 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO3Q8TAP4 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AL122018.1-201ENST00000446607 2310 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 PARK7-204ENST00000377493 795 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AC097065.1-201ENST00000425737 517 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AC098934.2-202ENST00000438944 1033 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AC253536.4-201ENST00000440539 267 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 GGNBP1-204ENST00000613113 887 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 CCT7P1-201ENST00000406551 1611 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AL138762.1-201ENST00000608554 1637 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 C8orf49-201ENST00000525043 1968 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 AC026271.1-201ENST00000447794 1348 ntBASIC13.85□□□□□ -0.19
LMO3Q8TAP4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LMO3Q8TAP4 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms