Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NCDNQ9UBB6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 MIR602-201ENST00000384960 98 ntBASIC12.95□□□□□ -0.34
NCDNQ9UBB6 HLA-DRB6-202ENST00000437183 1090 ntBASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AD000091.1-201ENST00000592379 287 ntBASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NCDNQ9UBB6 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC020658.7-201ENST00000624274 2442 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 TPI1P3-201ENST00000335020 740 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 KRT41P-201ENST00000393988 1293 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC096677.3-201ENST00000413162 387 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AL133517.1-201ENST00000413412 748 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 C2orf27AP2-201ENST00000438438 555 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC005336.1-201ENST00000585431 1243 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AC025165.4-201ENST00000602327 433 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AL512631.1-201ENST00000604086 840 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 AL513478.3-201ENST00000641038 1095 ntBASIC12.94□□□□□ -0.34
NCDNQ9UBB6 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.94□□□□□ -0.34
NCDNQ9UBB6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms