Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC12.45□□□□□ -0.42
CLK1P49759 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.45□□□□□ -0.42
CLK1P49759 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.45□□□□□ -0.42
CLK1P49759 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.45□□□□□ -0.42
CLK1P49759 PRSS3P1-201ENST00000503996 742 ntBASIC12.45□□□□□ -0.42
CLK1P49759 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CLK1P49759 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.45□□□□□ -0.42
CLK1P49759 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 AL031713.1-201ENST00000564813 661 ntBASIC12.45□□□□□ -0.42
CLK1P49759 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 AL133499.1-201ENST00000596207 608 ntBASIC12.45□□□□□ -0.42
CLK1P49759 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 AC005696.4-201ENST00000614400 3147 ntBASIC12.45□□□□□ -0.42
CLK1P49759 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 GBP1P1-201ENST00000394662 1740 ntBASIC12.45□□□□□ -0.42
CLK1P49759 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CLK1P49759 FAM90A17P-201ENST00000533716 1957 ntBASIC12.45□□□□□ -0.42
CLK1P49759 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.45□□□□□ -0.42
CLK1P49759 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.44□□□□□ -0.42
CLK1P49759 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 AL513497.1-201ENST00000624273 2083 ntBASIC12.44□□□□□ -0.42
CLK1P49759 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CLK1P49759 RPL3P2-204ENST00000413027 1203 ntBASIC12.44□□□□□ -0.42
CLK1P49759 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.44□□□□□ -0.42
CLK1P49759 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.44□□□□□ -0.42
CLK1P49759 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 KRT8P2-201ENST00000556193 944 ntBASIC12.44□□□□□ -0.42
CLK1P49759 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 HERC2P11-201ENST00000562845 725 ntBASIC12.44□□□□□ -0.42
CLK1P49759 AC100756.2-201ENST00000569537 736 ntBASIC12.44□□□□□ -0.42
CLK1P49759 AL009176.1-201ENST00000607876 650 ntBASIC12.44□□□□□ -0.42
CLK1P49759 AC010503.4-201ENST00000615487 688 ntBASIC12.44□□□□□ -0.42
CLK1P49759 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 POM121L7P-201ENST00000329949 2404 ntBASIC12.44□□□□□ -0.42
CLK1P49759 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLK1P49759 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLK1P49759 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.44□□□□□ -0.42
CLK1P49759 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms