Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RBMXP4-201ENST00000507797 1134 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AC137579.1-201ENST00000519978 836 ntTSL 3 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AL132801.1-202ENST00000559402 564 ntTSL 4 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 Metazoa_SRP.154-201ENST00000615469 268 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 FAM74A3-201ENST00000620271 472 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AC019197.1-210ENST00000625505 758 ntTSL 5 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 LAMTOR1-204ENST00000538404 1346 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AC005840.4-201ENST00000541242 2494 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 MYL9-202ENST00000346786 1024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 CLCP2-201ENST00000392050 421 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 C22orf23-202ENST00000403026 765 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 SHANK2-AS2-201ENST00000429268 356 ntTSL 2 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 TPTE2P6-201ENST00000440905 1275 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 HLA-DPB2-206ENST00000470997 776 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AC055733.1-201ENST00000506407 572 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AC006197.1-201ENST00000546669 465 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 LYSMD2-203ENST00000558126 775 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AC012184.1-201ENST00000566960 590 ntTSL 3 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AL390205.1-201ENST00000381279 1586 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AP001858.1-201ENST00000472881 1342 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 FAM238B-202ENST00000423917 1220 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 HMGN2P17-201ENST00000425872 743 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 ARHGAP26-AS1-202ENST00000433595 978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AC062028.2-201ENST00000437876 856 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 DLEU1-208ENST00000468168 982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AC024940.2-201ENST00000495623 606 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 LINC00649-211ENST00000600155 1108 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 Metazoa_SRP.201-201ENST00000622034 282 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AC007787.2-201ENST00000625100 599 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 AL513327.1-204ENST00000630229 870 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 PABPC1P11-201ENST00000428966 2007 ntBASIC19.4■□□□□ 0.7
RIMBP3Q9UFD9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIMBP3Q9UFD9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIMBP3Q9UFD9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.39■□□□□ 0.7
RIMBP3Q9UFD9 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC19.39■□□□□ 0.7
RIMBP3Q9UFD9 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIMBP3Q9UFD9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 JKAMP-203ENST00000425728 1636 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 PAGE3-201ENST00000374951 745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 AL512590.1-201ENST00000430691 821 ntBASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 LINC00545-201ENST00000440633 411 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 RN7SL634P-201ENST00000485467 292 ntBASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 LINC00499-202ENST00000507145 540 ntTSL 4 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 AC040970.1-201ENST00000520885 483 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 MIR4537-201ENST00000581717 70 ntBASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 AC025211.1-201ENST00000582272 373 ntTSL 3 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 LINC01872-201ENST00000594261 915 ntTSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIMBP3Q9UFD9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 AC005906.2-210ENST00000640468 1303 ntTSL 5 BASIC19.38■□□□□ 0.69
RIMBP3Q9UFD9 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms