Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 AL358781.1-202ENST00000321081 1360 ntBASIC13.72□□□□□ -0.21
MTHFRP42898 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MTHFRP42898 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.72□□□□□ -0.21
MTHFRP42898 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC13.72□□□□□ -0.21
MTHFRP42898 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 AL109983.1-201ENST00000603234 646 ntBASIC13.72□□□□□ -0.21
MTHFRP42898 MFSD12-215ENST00000615613 688 ntBASIC13.72□□□□□ -0.21
MTHFRP42898 AL117379.1-201ENST00000619319 677 ntBASIC13.72□□□□□ -0.21
MTHFRP42898 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 NCLP1-201ENST00000445357 1963 ntBASIC13.72□□□□□ -0.21
MTHFRP42898 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 CYP2B7P-201ENST00000541697 1476 ntBASIC13.72□□□□□ -0.21
MTHFRP42898 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MTHFRP42898 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
MTHFRP42898 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MTHFRP42898 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 AC091807.1-201ENST00000418838 1544 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC13.71□□□□□ -0.21
MTHFRP42898 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 FTLP3-201ENST00000427242 528 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC13.71□□□□□ -0.21
MTHFRP42898 RN7SL477P-201ENST00000488440 286 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 AADAC-202ENST00000488869 719 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.71□□□□□ -0.21
MTHFRP42898 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC13.71□□□□□ -0.21
MTHFRP42898 AL606834.1-201ENST00000553836 1169 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms