Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MCF2LO15068 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
MCF2LO15068 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
MCF2LO15068 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 SERF2-204ENST00000402131 586 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.84□□□□□ -0.19
MCF2LO15068 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 AP000244.1-201ENST00000424582 201 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 PSMD4P1-201ENST00000433951 1109 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 ASS1P2-201ENST00000439895 1223 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.84□□□□□ -0.19
MCF2LO15068 FAM213AP2-201ENST00000521579 683 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.84□□□□□ -0.19
MCF2LO15068 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 GOLGA2P7-209ENST00000560408 745 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.84□□□□□ -0.19
MCF2LO15068 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 AP001120.3-201ENST00000585729 489 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 AC006483.2-201ENST00000609813 515 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 AC026120.2-201ENST00000617239 309 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 AC022400.8-201ENST00000623453 3599 ntBASIC13.84□□□□□ -0.19
MCF2LO15068 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
MCF2LO15068 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC13.84□□□□□ -0.19
MCF2LO15068 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MCF2LO15068 FAM90A21P-201ENST00000510875 1396 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A15P-201ENST00000514465 1395 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A6P-201ENST00000515148 1394 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A16P-201ENST00000526662 1395 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A9P-201ENST00000527940 1395 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A5P-201ENST00000528738 1395 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A14P-201ENST00000530386 1395 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 FAM90A13P-201ENST00000534703 1395 ntBASIC13.83□□□□□ -0.19
MCF2LO15068 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC13.83□□□□□ -0.19
MCF2LO15068 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
MCF2LO15068 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
MCF2LO15068 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
MCF2LO15068 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.83□□□□□ -0.2
MCF2LO15068 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
MCF2LO15068 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MCF2LO15068 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
MCF2LO15068 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
MCF2LO15068 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
MCF2LO15068 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
MCF2LO15068 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MCF2LO15068 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.83□□□□□ -0.2
MCF2LO15068 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.83□□□□□ -0.2
MCF2LO15068 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MCF2LO15068 KRT18P4-201ENST00000422599 1288 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms