Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC008073.2-202ENST00000438414 674 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 RN7SL497P-201ENST00000476341 301 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 MYADML-202ENST00000490394 797 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 MESTP2-201ENST00000559787 889 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC007923.3-201ENST00000578645 292 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AL359183.1-201ENST00000623796 2132 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 TSPY26P-202ENST00000565928 3884 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 HDAC8-201ENST00000373554 833 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC093871.1-201ENST00000503815 534 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 SLED1-201ENST00000506741 751 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 ZEB2P1-201ENST00000515048 1141 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 ZNF970P-201ENST00000547456 223 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 5_8S_rRNA.4-201ENST00000636054 151 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 SEC24B-AS1-202ENST00000499713 1433 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PIK3R3-204ENST00000423209 1884 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 LINC00663-201ENST00000586645 1357 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 RCL1-203ENST00000381732 804 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AL139220.1-201ENST00000436802 520 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 RN7SL336P-201ENST00000580171 297 ntBASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC061992.1-202ENST00000587575 490 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 TLR8-AS1-201ENST00000451564 1349 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 RNF170-203ENST00000319104 1866 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 IYD-208ENST00000500320 2158 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CST13P-203ENST00000413633 1152 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC245052.2-201ENST00000413723 327 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AL139156.2-201ENST00000414059 340 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ARHGAP26-AS1-202ENST00000433595 978 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC002456.1-202ENST00000441971 450 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RPSAP4-201ENST00000488229 888 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ZNF646P1-201ENST00000621811 995 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AL358075.4-201ENST00000540385 1553 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 HADH-202ENST00000403312 1752 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MOG-219ENST00000376898 1027 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 HNRNPA1P34-201ENST00000391992 950 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MOG-222ENST00000396701 910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MOG-223ENST00000396704 675 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AL365258.2-201ENST00000447479 472 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms