Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC14□□□□□ -0.17
LMO3Q8TAP4 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14□□□□□ -0.17
LMO3Q8TAP4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14□□□□□ -0.17
LMO3Q8TAP4 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 PRADC1P1-201ENST00000412317 525 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 TEDDM2P-201ENST00000414169 786 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 HNRNPA1P21-201ENST00000424115 961 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 BCAS2P2-201ENST00000425064 674 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 KRT8P30-201ENST00000432100 650 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 RBMXP2-201ENST00000434705 1168 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 P2RX6P-202ENST00000450626 357 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 AREG-202ENST00000502307 956 ntTSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 DUT-207ENST00000559416 635 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14□□□□□ -0.17
LMO3Q8TAP4 RN7SL605P-201ENST00000577229 281 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 RN7SL678P-201ENST00000579533 299 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14□□□□□ -0.17
LMO3Q8TAP4 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC023509.4-201ENST00000602306 775 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 AC139713.2-207ENST00000641556 1292 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 NBPF13P-201ENST00000444082 1783 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 DGKZP1-201ENST00000378718 2776 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 CES1P1-201ENST00000421606 1704 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC14□□□□□ -0.17
LMO3Q8TAP4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 RNA5SP84-201ENST00000364740 107 ntBASIC13.99□□□□□ -0.17
LMO3Q8TAP4 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 CCND3P1-201ENST00000438347 580 ntBASIC13.99□□□□□ -0.17
LMO3Q8TAP4 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AC027612.2-202ENST00000445955 1199 ntBASIC13.99□□□□□ -0.17
LMO3Q8TAP4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AC023968.2-201ENST00000560593 1049 ntBASIC13.99□□□□□ -0.17
LMO3Q8TAP4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AP005264.6-204ENST00000588436 719 ntBASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AC009118.3-201ENST00000622896 873 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms