Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC14.09□□□□□ -0.15
O00370 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
O00370 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
O00370 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
O00370 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
O00370 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC14.09□□□□□ -0.15
O00370 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
O00370 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.09□□□□□ -0.15
O00370 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC14.09□□□□□ -0.15
O00370 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
O00370 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
O00370 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
O00370 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
O00370 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC14.08□□□□□ -0.15
O00370 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
O00370 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
O00370 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
O00370 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.08□□□□□ -0.15
O00370 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
O00370 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.08□□□□□ -0.16
O00370 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
O00370 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
O00370 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
O00370 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
O00370 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
O00370 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.08□□□□□ -0.16
O00370 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
O00370 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.08□□□□□ -0.16
O00370 ZNF877P-201ENST00000437614 612 ntBASIC14.08□□□□□ -0.16
O00370 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.08□□□□□ -0.16
O00370 AC015818.1-201ENST00000451011 244 ntBASIC14.08□□□□□ -0.16
O00370 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.08□□□□□ -0.16
O00370 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.08□□□□□ -0.16
O00370 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC14.08□□□□□ -0.16
O00370 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.08□□□□□ -0.16
O00370 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.08□□□□□ -0.16
O00370 AC009084.3-201ENST00000623356 437 ntBASIC14.08□□□□□ -0.16
O00370 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.08□□□□□ -0.16
O00370 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
O00370 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
O00370 AC008038.1-201ENST00000634247 1314 ntBASIC14.08□□□□□ -0.16
O00370 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 FAM183BP-201ENST00000409072 1595 ntBASIC14.08□□□□□ -0.16
O00370 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC14.08□□□□□ -0.16
O00370 AC244154.1-201ENST00000620148 1555 ntBASIC14.08□□□□□ -0.16
O00370 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
O00370 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC14.08□□□□□ -0.16
O00370 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
O00370 AL109809.1-201ENST00000418979 1367 ntBASIC14.08□□□□□ -0.16
O00370 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.07□□□□□ -0.16
O00370 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
O00370 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
O00370 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.07□□□□□ -0.16
O00370 KRT8P5-201ENST00000592443 1458 ntBASIC14.07□□□□□ -0.16
O00370 HNRNPMP1-201ENST00000560685 1768 ntBASIC14.07□□□□□ -0.16
O00370 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
O00370 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
O00370 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 MIR324-201ENST00000362183 83 ntBASIC14.07□□□□□ -0.16
O00370 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
O00370 GEMIN8P4-201ENST00000380526 729 ntBASIC14.07□□□□□ -0.16
O00370 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
O00370 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.07□□□□□ -0.16
O00370 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.07□□□□□ -0.16
O00370 RPS15P5-201ENST00000449885 432 ntBASIC14.07□□□□□ -0.16
O00370 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.07□□□□□ -0.16
O00370 VTI1BP1-201ENST00000486325 700 ntBASIC14.07□□□□□ -0.16
O00370 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms