Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC122688.3-201ENST00000623804 3467 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC006037.2-201ENST00000622975 2232 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 USP14-208ENST00000582707 1803 ntTSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 KIF28P-202ENST00000504864 3064 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 HADH-210ENST00000626637 1774 ntTSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 LINC00265-2P-201ENST00000413372 782 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 C2orf27AP1-201ENST00000618128 586 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC022748.3-201ENST00000621828 275 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 HLA-C-210ENST00000640219 976 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC099521.2-201ENST00000619354 2036 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AC053503.6-201ENST00000623864 1843 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 ALOX15P2-201ENST00000340858 1897 ntBASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RCL1Q9Y2P8 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ABR-201ENST00000291107 2673 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC10.82□□□□□ -0.68
RCL1Q9Y2P8 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms