Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 CYP2B7P-201ENST00000541697 1476 ntBASIC14.02□□□□□ -0.16
LMO3Q8TAP4 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 RNA5SP248-201ENST00000365602 127 ntBASIC14.02□□□□□ -0.17
LMO3Q8TAP4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 RPL17P11-201ENST00000417593 544 ntBASIC14.02□□□□□ -0.17
LMO3Q8TAP4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 MPRIPP1-201ENST00000452433 1089 ntBASIC14.02□□□□□ -0.17
LMO3Q8TAP4 AC025594.1-201ENST00000469533 543 ntBASIC14.02□□□□□ -0.17
LMO3Q8TAP4 BCL2L12P1-201ENST00000508390 733 ntBASIC14.02□□□□□ -0.17
LMO3Q8TAP4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO3Q8TAP4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AL356000.1-201ENST00000441073 1238 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC114812.4-201ENST00000506676 757 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 KRT8P34-201ENST00000577607 1044 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC104440.1-201ENST00000605010 343 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC123912.6-201ENST00000612657 315 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC002472.4-201ENST00000641915 272 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AC092053.3-201ENST00000641308 4975 ntBASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO3Q8TAP4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14□□□□□ -0.17
LMO3Q8TAP4 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 AC120024.4-201ENST00000624285 2143 ntBASIC14□□□□□ -0.17
LMO3Q8TAP4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LMO3Q8TAP4 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC14□□□□□ -0.17
LMO3Q8TAP4 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO3Q8TAP4 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms