Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.84□□□□□ -0.51
ZIC3O60481 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ZIC3O60481 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.51
ZIC3O60481 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ZIC3O60481 YAP1P1-201ENST00000401504 1393 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 AC005549.1-201ENST00000579438 1629 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ZIC3O60481 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 RBMXP1-201ENST00000408004 1191 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 OR7E37P-201ENST00000421076 897 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AL137244.1-201ENST00000422931 865 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC11.83□□□□□ -0.52
ZIC3O60481 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 CDK2AP2P2-201ENST00000478512 367 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 AP001102.1-201ENST00000528959 409 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
ZIC3O60481 ANKRD26P1-203ENST00000569528 966 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC11.83□□□□□ -0.52
ZIC3O60481 MIR4763-201ENST00000581461 92 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 PRMT1P1-201ENST00000604252 1009 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AL353622.2-201ENST00000605846 425 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 AC020904.3-201ENST00000624199 442 ntBASIC11.83□□□□□ -0.52
ZIC3O60481 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC11.83□□□□□ -0.52
ZIC3O60481 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC11.83□□□□□ -0.52
ZIC3O60481 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC11.83□□□□□ -0.52
ZIC3O60481 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ZIC3O60481 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.83□□□□□ -0.52
ZIC3O60481 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
ZIC3O60481 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZIC3O60481 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 AC120114.4-201ENST00000623731 2194 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
ZIC3O60481 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC11.82□□□□□ -0.52
ZIC3O60481 ASLP1-201ENST00000428790 637 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 AC105443.1-201ENST00000433754 712 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms