Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC006001.3-205ENST00000428370 579 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AL359504.1-201ENST00000448052 493 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AC106872.8-201ENST00000507651 684 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TMEM263-209ENST00000551813 1483 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 FHL2-204ENST00000393352 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TNNT2-224ENST00000509001 1330 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AL451165.1-201ENST00000334441 328 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 RNA5SP469-201ENST00000364165 109 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 MLN-201ENST00000266003 527 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC068620.1-201ENST00000470544 798 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 RPS19P3-201ENST00000480487 441 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC026464.4-201ENST00000570054 1284 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 KRT8P40-201ENST00000392131 563 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HMGB3P4-201ENST00000428776 514 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 MRPS22-202ENST00000465056 1099 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 PINLYP-203ENST00000562255 569 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CD300LF-210ENST00000583937 1275 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC095350.1-201ENST00000443685 1711 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 TRERNA1-201ENST00000431460 462 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms