Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 AC004687.1-201ENST00000579003 1625 ntBASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CYP46A1Q9Y6A2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CYP46A1Q9Y6A2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.15■■□□□ 1.78
CYP46A1Q9Y6A2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.14■■□□□ 1.78
CYP46A1Q9Y6A2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CYP46A1Q9Y6A2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CYP46A1Q9Y6A2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CYP46A1Q9Y6A2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.14■■□□□ 1.78
CYP46A1Q9Y6A2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CYP46A1Q9Y6A2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.77
CYP46A1Q9Y6A2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.14■■□□□ 1.77
CYP46A1Q9Y6A2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CYP46A1Q9Y6A2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CYP46A1Q9Y6A2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 AC080038.3-201ENST00000623346 1952 ntBASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 LINC01960-201ENST00000563759 1884 ntBASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CYP46A1Q9Y6A2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 AL356740.2-201ENST00000601559 647 ntBASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP46A1Q9Y6A2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 AC139530.1-201ENST00000575312 1977 ntBASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 AL499627.2-201ENST00000606283 725 ntBASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP46A1Q9Y6A2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 MIR3621-201ENST00000580529 85 ntBASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 AC241377.3-202ENST00000626088 1088 ntBASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 AC241585.3-202ENST00000628937 1088 ntBASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 AC245100.8-202ENST00000629247 1058 ntBASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CYP46A1Q9Y6A2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 LINC00565-201ENST00000562710 2331 ntBASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.09■■□□□ 1.77
CYP46A1Q9Y6A2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms