Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 AC137761.2-201ENST00000561729 223 ntBASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 AC145350.3-201ENST00000569033 163 ntBASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 LINC00543-201ENST00000567234 1845 ntBASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 AP004607.4-201ENST00000530158 1459 ntBASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 AC004687.1-201ENST00000579003 1625 ntBASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.53■■□□□ 1.52
SCN10AQ9Y5Y9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCN10AQ9Y5Y9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 AC004854.2-201ENST00000608450 1441 ntBASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 AC020928.2-201ENST00000588717 2197 ntBASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.51■■□□□ 1.51
SCN10AQ9Y5Y9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 AC073111.5-205ENST00000641717 521 ntBASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.5■■□□□ 1.51
SCN10AQ9Y5Y9 BX005040.4-201ENST00000637145 1518 ntBASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 AC068587.7-201ENST00000641602 218 ntBASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 HLA-L-209ENST00000420110 1011 ntBASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 CDCA4P2-201ENST00000441182 718 ntBASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SCN10AQ9Y5Y9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.48■■□□□ 1.51
SCN10AQ9Y5Y9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SCN10AQ9Y5Y9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.48■■□□□ 1.51
SCN10AQ9Y5Y9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SCN10AQ9Y5Y9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SCN10AQ9Y5Y9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
SCN10AQ9Y5Y9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 AC087239.1-201ENST00000622671 572 ntBASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SCN10AQ9Y5Y9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.46■■□□□ 1.51
SCN10AQ9Y5Y9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms