Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ALDH1A3-203ENST00000557963 1670 ntBASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA6Q9Y5G7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGA6Q9Y5G7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA6Q9Y5G7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGA6Q9Y5G7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA6Q9Y5G7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHGA6Q9Y5G7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA6Q9Y5G7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA6Q9Y5G7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA6Q9Y5G7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA6Q9Y5G7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 AL162430.1-201ENST00000480705 870 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 pRNA.6-201ENST00000610482 90 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 pRNA.5-201ENST00000612139 90 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 pRNA.11-201ENST00000618423 90 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 pRNA.13-201ENST00000619112 90 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHGA6Q9Y5G7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA6Q9Y5G7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHGA6Q9Y5G7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA6Q9Y5G7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA6Q9Y5G7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA6Q9Y5G7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA6Q9Y5G7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA6Q9Y5G7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
PCDHGA6Q9Y5G7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA6Q9Y5G7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA6Q9Y5G7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA6Q9Y5G7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGA6Q9Y5G7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 AC233723.2-201ENST00000623798 2106 ntBASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA6Q9Y5G7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms